KEGG T09160: 130521543

Takifugu flavidus (sansaifugu): 130521543

Entry

130521543         CDS       T09160

Symbol

cwc22

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog

K13100

pre-mRNA-splicing factor CWC22

Organism

tfs Takifugu flavidus (sansaifugu)

Brite

KEGG Orthology (KO) [BR:tfs00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tfs03041]
    130521543 (cwc22)
Spliceosome [BR:tfs03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    130521543 (cwc22)
Complex C
   U4/U6.U5 tri-SnRNP related factors
    130521543 (cwc22)

SSDB

Motif

Pfam:

MA3 MIF4G

Other DBs

NCBI-GeneID:

130521543

NCBI-ProteinID:

XP_056881148

Position

1:14177276..14184624

AA seq 943 aa
MDSPGRNHSSSPVQRESRGSSEDKTIPAAEVPQQADVVERSPKEKEGESPPHSPADKPTS
RGSASSSSEHSSSNSSDDDDEDDDGQHNGTQRKIRSSVAQIRRSRSRSKSRERDGSISSE
KSRSRSREKDRSRSRERSRSGSRDRSRYRRRDRSRERDYDRRGHYPRDRYGDHYGNRGSN
FDQRNNWDRDVRRRGRSASPPADREAADKPPVKKKKEDVDPVLTRTGGAYIPPAKLRLMQ
QQITDKSSLAYQRMSWEALKKSINGLINKVNVSNIVNIIQELLQENIVRGRGLLARSVLQ
AQAASPIFTHVYAAVVSIINSKFPQIGELILKRLILTFRKSYRRNLKQQCLTASKFVAHL
INQNVAHEILCLEMLTLLLERPTDDSVEVSISFLKECGLKLTEVSPRGINAIFERLRNVL
HESAIDKRVQYMIEVMFAIRKDGFKDHPVIPDGLDLVDEEDQFTHMLPLEDEYSTEDILN
VFKLDPDFLENEEKYKTIKREILDEGSSDSGGDDDGSDDDEEDEDKNEEEGEDGEKVTIF
DQTEVNLVAFRRTIYLAIQSSLDFEECAHKLIKMDFPESQTKELCNMILDCCAQQRTYEK
FFGLLAGRFCLLKKEYMESFEAIFAEQYETIHRLETNKLRNVARLFAHLLYTDSVPWSVL
ECIRMSEETTTSSSRIFVKILFQELCSYMGLPRLNQRLKDVTLQPFFEGLFPRDNPRNTR
FSINFFTSIGLGGLTDELREHLKNAPKMIMTQNQEVESSDSSSSSSSSSSSSDDSTSSDS
SSESDSDSSSSSSSSSDSDTRRSKRKNRKERSEEKKKKKEKLKTRKEKPSDKKRSRHQKA
AETDSDEEQHGRSDRRGHAREPERRRERAPEAEEHAREGARGSRRDKRSEEREQQEERRK
KDMEGRQAERERARETEKRERKEERDKENRDRNRDERSDRRRR

NT seq 2832 nt +upstreamnt +downstreamnt
atggactctccgggtagaaaccatagttccagtcctgtacagagagagagccgcggatca
tcagaagacaaaactattccagcagcagaggttccccaacaggccgatgtggttgagaga
agccccaaagagaaagagggagaatctcctccccacagtcctgcagacaagccgacctcc
agggggtctgcatccagcagctcagagcacagcagcagtaacagcagtgacgatgatgat
gaagatgatgatggccagcataatggaacccagaggaagataaggagcagtgtggcacaa
atcagaagatcgagatccaggtccaaatctagagaacgagatgggtcgatatccagtgag
aaaagcagatccagatccagagaaaaagatagatcccggtccagagagagaagcagatct
ggatccagggacagatctaggtacagaagacgggacagatccagagagagggactatgac
aggagaggacactatccccgggatcgctatggcgatcactatggcaatcggggttcaaat
tttgaccagcggaacaattgggacagggatgtgaggaggcgcggccgctcagcctcccct
ccagcagatagggaggcagctgataagcctccagtcaaaaagaaaaaggaggatgttgac
ccagttttaacaaggactggcggcgcttatatcccacctgcaaagctccgtctgatgcag
cagcaaatcactgacaagagcagcctggcctatcagaggatgagctgggaggcgctcaaa
aagtccattaacggtctcatcaacaaggtcaacgtgtcaaatattgtcaacatcatccag
gagctgctgcaggagaacatcgtcagggggaggggtctgctggcccgttcggtgttgcag
gctcaggcagcgtcgcccatcttcactcacgtttacgcagccgttgtttccatcatcaac
tccaaattccctcagattggagagctgatcctcaagcgtctcatcctcacgttcaggaag
agctaccgccgaaacctcaagcaacagtgtctcacagcctcgaagtttgtggcacatctc
atcaaccagaacgtggcccatgagatattgtgtctggagatgctcactctgctgctggag
cgtcccacggatgacagcgtggaggtttccatctccttcctgaaggagtgtggactcaaa
ctcactgaggtgtccccacgaggcattaatgcaatatttgagcgtctcagaaatgtcctc
catgagtcggctatcgataagagggtccaatacatgattgaggtcatgtttgccatcaga
aaggacggtttcaaagaccatcctgtaatcccagatggtctggaccttgtggacgaagaa
gatcagttcacccatatgctgccactggaggatgagtacagcacagaggatatcctcaat
gtgtttaagctggacccagacttcctggaaaatgaggagaaatacaaaacgattaaaaga
gagatcttggatgagggcagcagcgattcaggaggggatgatgatggcagcgatgatgat
gaagaggatgaagacaagaatgaggaagagggagaagatggtgagaaggttaccatcttt
gaccagacagaagtaaacctggttgcattcagaagaaccatctatctcgctatacagtcc
agtttggactttgaagagtgtgctcacaaactgatcaagatggactttcctgagagccaa
acaaaagaactgtgtaacatgatcctggactgctgtgctcagcaaaggacctatgagaag
ttctttggtctactagcggggaggttctgtctgctgaagaaggagtatatggagagtttt
gaggccatatttgcagagcagtacgaaacaattcacagactggagaccaacaaactcagg
aatgtggcacggctgtttgctcacctactgtacacagactctgtgccctggagtgtgttg
gagtgcatcaggatgagtgaggagaccacaacatcatccagcaggatttttgtaaagatc
cttttccaggaactctgttcttacatgggcctccccagactcaaccagaggctcaaagat
gtgactctacaaccattctttgaagggctttttcctcgggacaatcccagaaacacccgc
ttttccattaacttcttcacctctattggactgggaggactgacggatgagttaagggag
catctgaagaacgctccaaagatgatcatgactcagaaccaggaggtggaatcttctgac
tcctcctcatcatcctcatcatcctccagctcatccgatgactcgacctcctcagactcc
tccagtgagtcagattcagactcctccagcagcagcagcagcagctcagactcagacacc
agacgcagcaagagaaaaaacagaaaagaacgaagtgaggagaaaaagaagaagaaagag
aagctgaagacgaggaaggagaaaccttcagataagaagagaagccggcaccagaaagct
gctgagacagacagcgatgaagagcagcatgggaggagcgacaggagaggccacgctcgc
gagccggagcggcggcgcgagcgcgcacctgaggcagaggagcacgcacgtgagggcgct
cgagggagcaggcgagacaaacgctcagaagaaagagagcagcaggaggagagaaggaaa
aaggatatggaaggcaggcaggcagaaagggagcgagccagggagactgagaagagagag
agaaaagaagagagggataaagagaacagagacaggaaccgagatgagaggagcgacagg
aggaggagataa

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

Download RDF

DBGET integrated database retrieval system