KEGG   Takifugu flavidus (sansaifugu): 130531404
Entry
130531404         CDS       T09160                                 
Name
(RefSeq) LOW QUALITY PROTEIN: rab11 family-interacting protein 1
  KO
K12484  Rab11 family-interacting protein 1/2/5
Organism
tfs  Takifugu flavidus (sansaifugu)
Pathway
tfs04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:tfs00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    130531404
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tfs04131]
    130531404
Membrane trafficking [BR:tfs04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    130531404
SSDB
Motif
Pfam: C2 RBD-FIP DUF4254
Other DBs
NCBI-GeneID: 130531404
NCBI-ProteinID: XP_056899390
Position
9:complement(5196478..5204532)
AA seq 1401 aa
MMSLIDLDDDQRWVPTHVNVTVLRARGLRTKGKHGSRYLYTIIQVGKEKYTTGLVEKVEV
PEWNEECSFELLPGILEDGGRDAYPAGSADLVLTVMHRVLIGLDVFLGQAIIPLDRIFQE
GMCPRDEWFKLNSKSGRKEKERGGLQVTVQFTRNNMTASMFDLTIKDKPRSVFGKLKDRV
TGRKRGDVESSSAILPGRYAALSGSLGQPLGEVGGGALEPPDAEITEEKKSKMKEFLKGK
LRKSSDTRSCASLASEGSGFSVASDQPPPSLDLLSDPPSSPIYSTKVRVDALYGETDLAK
KVLTSQHTTNVLTHKRAFSDEASKIKTSFSRANPAMESLKGASMTQSKSSVCINGSHVYD
SEPSTPRGSAAHPCKLVLLEKCTPLSRSLQNLTKRSEDRGSFAEGRRWSFDKVKKEEKEE
EKDPLSLSPPARTGSQPVQGATPAVSSTAGSPDKGKKPRKMLFSTGRCESLPAKSDLNQA
PSLSDRRLRGWFGSGDSQNKPRLEFSPKVESSSDVPPPIPPRSPVPPLCSPPSTSPSSIF
SSDDNHLSPSINPVPPLNSFPPNLHHNPFFEELLAEESQRSPPFLPSNSPFNHTALPCTA
SPAHDANANIKRERPRPIAGQISLPAQLLTPGPLDPSKGLQSLSDCTGVYEDSFEAFASS
RLNSPKASLPPKQSSTSPVSSHGCGSFIFNDAQELQTFDEEPPPLPPRKPVRAPVNEMCS
DGWLHRGQELAVHKEAFLLSQTGVASRHRGKEGDHHTFPDSHTSSEASDISCTSQPSTDI
TSPVPMSEEKLQKFRYEPLEDNRDCLGGMLFEQDLYGRACLGNYRQAKVSTHHLSINAEE
TKSKITSVSSASRKLLDSVLPVKDLLNLSSLPSKPSLKVLDVPAPQMEEAEASPLGATPT
NNGSFSMNLGDLNMNVRNCDSSLADSESSSQTEAADILKSVRNCGETPPKLTLKGSGKAE
ALPEVFTLKDTYITGMNSSFEITTLMNKRCKGSLGCQSCQCEVGSVKPPNQGSCSPALDL
GADTGGLFADFKKTPVDFDDNGNLQEKPSPPNPAGLFPGVISARIRPKRVSRQSSSSSPS
SQNNRDDGGFEQLLSLVQSISGANEGPLSYQPVKSALSSILACKNQSDLHGDHVDEAQAH
PDTESRSKSPPPSIENSSKFSQVSFEDLHAKVAPPRKTPSKTEPENISPTISSEPHPAHP
FGPTLHPSGPSAEARTALTVAPTSSSSSSSSSSSFTTSTSNTDQSLVDALPSLLPEETQP
ASNLPHLESRTHPVKPLTSGQSEKKESRSVLEKLKSTIAPGWSAQQVTAEPQKIQEVTED
RSAQYQHLTNMELISLLLQQEMDMQKQQXASEQQEAQLQKCEAELRKVKSQVRDLEDYID
NLLLRIMEQTPTLLQVRSRHK
NT seq 4206 nt   +upstreamnt  +downstreamnt
atgatgtccctgattgatctggacgatgaccagaggtgggtgcccacccacgtcaatgtc
accgtcctccgcgctagaggactccgaaccaagggcaagcatggcagccgatacctctac
accatcatccaggtgggaaaggaaaagtacacgaccgggctggtggagaaggtggaggtg
cccgagtggaacgaggagtgttctttcgagctgcttccgggcatcctggaggacggtggc
cgggacgcctacccagcgggcagcgcggacctggtgctgacagtcatgcaccgggttctg
atcggactggacgtgtttctgggacaagccatcatccctcttgataggatatttcaggag
gggatgtgtcctcgagatgaatggttcaagcttaactcaaagtctggaagaaaggagaag
gaacgtggaggtctgcaggtgacggtgcagttcactcgcaacaacatgacggccagcatg
tttgacctcaccataaaggacaagccccgctccgtttttggcaagctcaaggaccgggtc
acgggcaggaagaggggggacgtggagtcttcttcggctatcctgccaggacgatacgcc
gccctctcgggatccctggggcaaccgttgggagaagtgggtggaggcgccctggagcca
ccagatgcggagataacagaggagaagaagagcaagatgaaagagtttctgaaaggcaaa
ctgcgcaagtcatctgacaccagatcatgtgcatcgctggcttcagaggggagcggattt
tcagtggccagtgatcagcctcctcccagtctggatctgctgtcggacccacccagctcg
cccatctactccaccaaagtgagagtggatgctctttatggagagacagatttggctaaa
aaagttctgaccagccagcacaccacaaatgttcttacacacaaacgggccttcagtgac
gaggcaagcaaaatcaaaacatccttttctcgagcaaatcctgcaatggagtctctgaaa
ggcgcgagcatgacccagtccaagtcttccgtctgcataaatgggagccacgtgtacgac
tcggagccctccactccaaggggctctgcagcccatccatgcaaactggtcctgctggag
aagtgcaccccgctctcacgatctcttcagaacctcaccaagaggagtgaggacagaggg
tcgtttgctgagggcagacgctggtcctttgacaaggtgaagaaggaagaaaaggaggaa
gagaaagaccctctttccttatctcctccggctcggacggggtctcagcctgtgcaggga
gcgaccccagctgtgtcctctactgcaggttctccagacaaaggaaagaaacccagaaag
atgctgttctccacaggaaggtgtgagtccctcccagctaaatcagacctgaaccaggct
ccttccttgtctgacaggaggctcagaggctggtttggttctggtgactcccaaaacaag
ccaaggctggagttttctcctaaggtagaaagcagctcagatgtaccccctcccatccct
cctcgctcccccgtgccacctctgtgctcccctccctctacctccccctctagtattttc
tcatcagatgacaatcatctttctccctcaataaacccagtcccacctttgaacagtttc
cctccaaacttgcaccataaccccttttttgaggagcttctagctgaagaatcccagagg
tctcctccttttttaccctctaactccccctttaatcacacagctctgccctgcacagct
agccctgctcacgatgctaatgcaaacataaagagggagcgccccagacctatagctgga
cagatatcgctccccgcccagctgctcacgccaggtccattggacccctccaagggctta
cagtccttgtcagattgcacaggagtatatgaagactcgttcgaagcctttgcatccagc
cgtctcaattctccaaaagcaagtcttcctccgaaacagtcaagcactagtccagtttca
tctcacggctgtggttccttcatatttaacgatgcacaagagctgcaaacgtttgatgag
gagcctccacctttgcctccaaggaaacctgtgagagctccggtgaatgaaatgtgctca
gatggctggttgcacagaggtcaagaattagcagtccacaaagaagccttcctcctctcg
cagaccggcgtggcctcacggcatcgtgggaaagaaggtgaccaccacactttcccagac
tctcacacgagcagcgaagcgtcggacatcagctgtacctcccagccttccaccgatatc
acctcacctgtgcccatgtctgaagaaaagcttcaaaagttcaggtacgaacctttggaa
gataacagagattgtttgggcgggatgttgtttgaacaagatctctatggacgtgcttgt
ttagggaactaccgacaagctaaagtcagcacccatcatttatccatcaatgctgaagaa
acaaaaagtaagatcacatccgtcagttcagcctccagaaagcttcttgacagtgtgttg
cctgttaaagatctcctcaacttgtcatctcttccctcaaaaccaagtttaaaggtgcta
gatgttccagctccacaaatggaggaagcagaagcttctcctcttggagccacgcccaca
aacaatggttccttctccatgaacctgggagatttgaacatgaatgtgaggaattgtgat
tccagccttgctgattcagagagttcctctcagacagaggcggctgacatcctcaaaagc
gtgagaaattgtggagagactcctccaaaactgacactgaaaggttctggtaaagcagaa
gcacttcccgaggtgtttactttgaaggacacctacataacagggatgaactcttctttt
gaaataaccacactgatgaacaaacggtgcaaaggctcactgggttgccaatcttgtcag
tgtgaagttggtagtgtgaaaccaccaaatcaaggatcctgttccccagctcttgattta
ggagctgatacaggaggattatttgctgattttaagaagacgcctgtcgactttgacgac
aatggaaacctacaagaaaaacccagcccgcctaacccagctggattattccctggagtg
atcagtgcacgtattagaccaaaacgagtgtcccggcagagcagcagcagcagccccagc
agccaaaacaacagggacgatggcggatttgaacaattgctgtcccttgttcaaagtatt
tcaggggccaatgaggggccgttgtcctaccagcctgtgaagtcagcgctgtcctcgata
ctggcgtgtaaaaatcagtcagatctgcatggagatcatgttgacgaagcgcaggcccat
ccagacacggagtcccgttcaaaatcgcctccaccgtcgatcgaaaactcctccaaattc
tctcaagtcagtttcgaggacctccacgctaaagtagcaccacctaggaaaaccccttca
aagacagaaccagaaaatatatctcccaccatctcctccgagccccaccccgcccatccc
tttggcccaaccttgcatccctcagggcccagtgctgaagctcgcactgctctgacagta
gctcccacctcctcctcctcttcctcctcctcctcctcctccttcaccacctccacctcc
aacactgaccagtccctggttgatgcactgccctcacttttgcctgaggagacacagcca
gctagcaacctgcctcatctggagagcagaactcatccagtgaagccgttaacctccggc
cagtcagagaagaaggagagtcgctcagttctggagaagctaaagtctaccatcgctcca
ggatggagcgcacagcaggttacagcagagcctcagaagattcaggaggtgaccgaggac
cggtcggcccagtaccagcacctgaccaacatggagctgatctccctgctcctgcagcag
gagatggacatgcagaagcagcagngcgcctccgagcagcaggaggcgcagctgcaaaag
tgcgaggcagagctgagaaaggtcaagtcccaggttcgggacctggaggactacattgat
aatcttttactgcggatcatggagcagacgccgaccctgcttcaagtgcgcagcagacac
aaatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (7)   

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