KEGG   Torulaspora globosa: HG536_0E02950
Entry
HG536_0E02950     CDS       T06981                                 
Name
(RefSeq) uncharacterized protein
  KO
K03679  exosome complex component RRP4
Organism
tgb  Torulaspora globosa
Pathway
tgb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tgb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HG536_0E02950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tgb03019]
    HG536_0E02950
Messenger RNA biogenesis [BR:tgb03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     HG536_0E02950
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     HG536_0E02950
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 ECR1_N_2 RRP40_S1
Other DBs
NCBI-GeneID: 59326580
NCBI-ProteinID: XP_037140058
UniProt: A0A7G3ZIP8
Position
5:532594..533664
AA seq 356 aa
MSEVITVVRRKGAFQQFGEIVEKLDEEDVDIEMTEASESGLEGEKSGLQVVTPGELVSEN
PGWMRGHGTYFLDNMTYSSVAGTVSKVNRLLSVIPLKSRYSPETGDHIVGRIAEVGNKRW
RVDIGGRQHAVLMLGSVNLPGGILRRKSESDELQMRSFLKEGDLLNAEVQSLFQDGSASL
HTRSLKYGKLRDGMFCQVPSSLIVRSKNHTHNLPGSVTVVLGVNGFIWLRKTSKMDSARD
APSGASMGSTGGPTGAKSLRADTVSITRLEEESSWQIYSDQNDPSITSSIRQTICRYANV
IKALAYCEIGITQERIVSAYEASMAYSAVGSLIEREVMESLGDDVLNAEKMRGSPF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgtctgaagtgatcacagttgttaggaggaagggtgctttccagcaattcggcgagatt
gtggaaaaattggacgaggaagatgtagacatcgagatgacggaggcaagcgagagtgga
ttggagggcgagaagtcgggattgcaagttgttacgcctggtgagcttgtcagcgaaaat
ccaggctggatgaggggccatggcacgtattttttggataatatgacgtactcgtcagtc
gcgggaactgtgtcgaaagtgaacagactgttgtctgttataccgcttaaaagtcggtat
tcgcccgagaccggcgaccacatcgttggcagaatagcagaggtcggcaataagaggtgg
cgagtggacatcggcgggagacagcatgcggtgctgatgctggggtcggtgaacctgccg
ggtggcattttgagaaggaagtcagagagcgatgagttgcagatgagaagctttttgaag
gagggcgatctgctgaatgctgaagtacagtcactgttccaggacgggagtgcgtcgcta
cacactagatcgctcaagtatggaaaattgcgcgatggtatgttttgccaagtgccaagc
tcgttgatcgtaagatccaagaatcacacacataacctccccggcagcgtcactgtagtg
ctgggggtcaacgggttcatatggctgaggaaaacgtctaagatggacagcgccagagac
gcaccttcaggcgccagcatgggttccaccggtgggcccacgggagctaagtcgttacgt
gcagatacagtgtcgatcaccagattggaagaagagtcttcgtggcagatatattcggat
cagaacgacccttcgataaccagcagtattagacagaccatatgtcgctatgcgaacgtg
atcaaggcgcttgcgtattgcgagatcggtattacgcaggaaagaatcgtcagcgcttat
gaggcaagcatggcatattctgcagttggcagcctgatcgagagggaagtaatggagagc
ctaggagacgacgtgctcaacgcggaaaagatgagaggttcaccgttctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (10)   

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