KEGG   Thalassospira sp. A40-3: IT893_01430
Entry
IT893_01430       CDS       T08364                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
thai  Thalassospira sp. A40-3
Pathway
thai01501  beta-Lactam resistance
thai01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:thai00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    IT893_01430
   01503 Cationic antimicrobial peptide (CAMP) resistance
    IT893_01430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:thai03036]
    IT893_01430
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:thai02000]
    IT893_01430
   01504 Antimicrobial resistance genes [BR:thai01504]
    IT893_01430
Chromosome and associated proteins [BR:thai03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    IT893_01430
Transporters [BR:thai02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   IT893_01430
Antimicrobial resistance genes [BR:thai01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    IT893_01430
SSDB
Motif
Pfam: HlyD_D23 HlyD_3 Biotin_lipoyl_2 Biotin_lipoyl CusB_dom_1 OEP
Other DBs
NCBI-ProteinID: QPO12213
Position
319380..320549
AA seq 389 aa
MARKSTLLIAGVALIVVAASAYIFAKDDITALIAPDAQPASTAQRGGGGERSLPVIAEYA
SLMDEKTVVEAVGTGKSALGVSIYPAVSGEVADVLVRAGDKVTEGQVLVILDSDRERLAR
DLAAVQARDAEQLLARYEKARPLGAVAESEVDSARTALAEARIALDQAEVNLADRTILAP
FDGIVGIPQVEAGDRVDSSTAIVTLDNIDSILVDFEVAETRFDNVRPGQSVRVETWSLPG
EEFTGVVESIGSRIDPESRTFAVRARVPNPNSRLLAGMSFAVYVDIEGKQYPAVAEISVL
WGDEGTYVWRIGDEDKVSRVPVRVVKRTNGRILLDGGIEEGDLVVVEGVLRLRPGRTVSA
TIRGDNPAPENAPSDAGGVATREGAGEGS
NT seq 1170 nt   +upstreamnt  +downstreamnt
atggcgcgtaaatcaacgcttctgatcgcaggtgttgcactgattgttgttgcggcctct
gcctatatctttgccaaagacgacatcacggcgttaattgcgcccgatgcgcaacccgca
agcacggcacagcgcggcggtggcggcgaacgcagtcttccggtcattgccgaatatgcc
agcctgatggatgaaaagaccgttgtcgaagcggtcggcacgggcaaatcggccctgggc
gtttcgatctatccagccgtgtcgggcgaagttgcagatgtgcttgtacgcgccggtgac
aaggtgaccgagggacaggttcttgtcatcctggactctgatcgcgaacgccttgcccgc
gatcttgctgctgttcaggcccgcgatgccgaacaacttcttgcccgctatgaaaaggcc
cgtccgctgggtgccgttgccgaaagcgaagtcgacagtgcccgcaccgccctggccgag
gcccgcattgcccttgatcaggcagaggtcaatctggccgatcggaccattctggccccg
tttgatggcatcgtcggcattccgcaggttgaggctggcgaccgtgttgacagctccaca
gccatcgtaacgcttgataatatcgatagcattctggtcgatttcgaagttgccgaaaca
cggtttgataatgtccgtcccggccagtctgtccgggtcgaaacctggagcctgccgggc
gaggaattcaccggtgtggttgagtctattggcagccgtatcgatcccgaaagccgcacc
tttgccgtgcgcgcccgggtgccaaaccccaatagtcgcctgctcgccgggatgtccttt
gcggtttatgtcgacatcgaaggcaaacaataccccgctgttgccgaaatctcggtcctg
tggggtgatgaaggcacctatgtctggcggatcggcgatgaagacaaggtctcgcgcgtt
cccgtccgtgttgtgaaacggaccaatggccggatccttctggatggcgggattgaagag
ggtgatctggtcgtggtcgagggcgtcttgcgtctgcgtccgggccggactgtttcggca
accattcgcggtgataaccccgcgcctgaaaatgcgccgtcggatgcgggcggcgttgcc
acccgcgaaggcgctggcgaggggtcctga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (7)   

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