KEGG   Thalassospira sp. A40-3: IT893_15480
Entry
IT893_15480       CDS       T08364                                 
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
  KO
K03274  ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
Organism
thai  Thalassospira sp. A40-3
Pathway
thai00541  Biosynthesis of various nucleotide sugars
thai01100  Metabolic pathways
thai01250  Biosynthesis of nucleotide sugars
Module
thai_M00064  ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:thai00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    IT893_15480 (rfaD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01005 Lipopolysaccharide biosynthesis proteins [BR:thai01005]
    IT893_15480 (rfaD)
Enzymes [BR:thai01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.20  ADP-glyceromanno-heptose 6-epimerase
     IT893_15480 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:thai01005]
 Core region
  IT893_15480 (rfaD)
SSDB
Motif
Pfam: Epimerase GDP_Man_Dehyd 3Beta_HSD RmlD_sub_bind NAD_binding_4 Polysacc_synt_2 KR Sacchrp_dh_NADP NAD_binding_10
Other DBs
NCBI-ProteinID: QPO11143
Position
complement(3376476..3377462)
AA seq 328 aa
MLIVTGGAGFIGSNIVAALEERGETDIVVVDRLRDGIKWKNIAKRNLRDIVHPDELPHFL
EEHAGNVEAIFHMGAISATTETDADKIVVNNLKLTAWLWEWCSRHSSRLIYASSAATYGD
GKQGFDDSFDDADLAKLAPLNAYGWSKHATDRRFRRILDQNGFRPKQWAGLKFFNVYGPN
EYHKGGMRSVVSQLFDKLSNGETATLFKSHHPDYEDGGQLRDFVWVGDVVDIIMWLYDNP
QVSDLFNIGTGKARSFKDLALAVFSAMGKEPDIKFVPTPESIRDKYQYFTEANMTKLREA
GYGKEMTSLEEGVRSYVQDYLATEDPFR
NT seq 987 nt   +upstreamnt  +downstreamnt
atgcttatcgtcactggtggtgccgggtttatcggttccaatattgttgctgcccttgaa
gagcgtggcgaaaccgacattgtcgtcgttgatcgcctgcgcgatggcatcaaatggaaa
aacatcgccaagcggaacctgcgtgacattgttcatcccgatgaactgccgcatttcctt
gaagagcatgcaggcaatgtcgaggcgattttccatatgggcgcgatttccgcgaccacg
gaaaccgatgccgacaagattgttgtcaacaacctaaaactgacggcctggctgtgggaa
tggtgttcgcgccactcatcgcgcctgatttatgcatcgtcggcggcaacgtacggcgat
ggcaagcagggctttgatgacagctttgatgacgccgatctggcgaaactggcaccgctc
aatgcctatggctggtccaagcatgccaccgatcgccggttccgccgtattctcgatcag
aacggtttccggccgaaacagtgggcagggcttaagttctttaacgtctatggcccgaac
gaatatcataagggcggcatgcggtccgtggtgtcgcagctgtttgacaagctttcaaac
ggcgaaaccgcgaccctgtttaaatcgcatcatcccgattatgaagatggcggccagttg
cgtgacttcgtctgggtcggtgatgtggtcgatatcatcatgtggctttatgacaatccg
caggtcagcgatcttttcaatatcggcaccggcaaggcgcgcagtttcaaggatctggca
ctggcagtgtttagcgccatgggcaaggagcctgatatcaagttcgtgccgacgccggaa
tcgatccgcgacaagtaccagtatttcaccgaagccaatatgaccaagctgcgcgaagca
gggtatggcaaggaaatgacatcgcttgaagaaggcgtgcggtcttatgtgcaggattat
cttgcgaccgaggacccgttccgctga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (9)   
   Pfam (9)   
All databases (10)   

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