KEGG   Thermus sp. CCB_US3_UF1: TCCBUS3UF1_22390
Entry
TCCBUS3UF1_22390  CDS       T01866                                 
Name
(GenBank) hypothetical protein
  KO
K06958  RNase adapter protein RapZ
Organism
thc  Thermus sp. CCB_US3_UF1
Brite
KEGG Orthology (KO) [BR:thc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thc03019]
    TCCBUS3UF1_22390
Messenger RNA biogenesis [BR:thc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     TCCBUS3UF1_22390
SSDB
Motif
Pfam: RapZ-like_N PapZ_C AAA_18 AAA_22 SKI AAA_33
Other DBs
NCBI-ProteinID: AEV17275
Position
2221312..2222133
AA seq 273 aa
MRFLVLTGLSGAGKTTAKGFLEDLGYFVVDNLPPGLWKPLLEALEGKGVVRAGVVLDARA
LAFFDRLEEALEALRPVVVYLEARPEILLRRYNLTRRLHPLGAGNLMREIGEERKALGPL
RARAHLVLDTSELSPRALKEALARFLGEEQGFVLRLLSFGFKWGPPQEADLVLDVRPLPN
PHYDPLLKPKTGLDPEVRAYVFREEHEAYYRALLAVAGLAAEGARREGRAFYTVAVGCTG
GRHRSVAVAERLAEELSGRFAVEVSHRDVAKEA
NT seq 822 nt   +upstreamnt  +downstreamnt
atgcgctttctggtgctcacggggctttcgggggcggggaagaccaccgccaaggggttc
ttggaggacctgggctacttcgtggtggacaacctccccccaggcctttggaaaccgctc
ctggaggccctggaagggaagggggtggtgcgggcgggggtggtgttggacgcccgggcc
ctggccttctttgaccggctggaggaggccctggaagccctcaggccggtggtggtctac
ctcgaggcccgccccgagatcctcctaaggcgctacaacctcacccgccgcctccacccc
ttaggggcaggcaacctcatgcgggagatcggggaggaacggaaggccctcggcccctta
cgggcccgggcccacctggtgctggacacctcggagctctcccccagggccctcaaggaa
gccctggcccgcttcctgggggaggaacaggggtttgtcctccgcctcctctccttcggc
ttcaagtgggggccaccccaggaagccgacctggtcctggacgtccgccccctgcccaac
ccccactacgaccccctcctcaagcccaaaacggggctggaccccgaggtgcgggcctac
gtcttccgggaggagcacgaggcctactaccgcgccctcctggccgtggcgggcctggcg
gcggaaggggcaaggcgggagggccgggccttttacaccgtggccgtgggctgcaccggg
gggcggcaccggagcgtggccgtggccgagaggctggcggaggagctttccgggcgcttc
gccgtggaggtgagccaccgggatgtggccaaggaggcgtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (8)   

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