KEGG   Thiohalobacter sp. COW1: TspCOW1_16420
Entry
TspCOW1_16420     CDS       T08363                                 
Name
(GenBank) nucleotide-binding protein
  KO
K06958  RNase adapter protein RapZ
Organism
thic  Thiohalobacter sp. COW1
Brite
KEGG Orthology (KO) [BR:thic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:thic03019]
    TspCOW1_16420
Messenger RNA biogenesis [BR:thic03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     TspCOW1_16420
SSDB
Motif
Pfam: PapZ_C RapZ-like_N AAA_18 AAA_33 AAA_22 AAA_16 AAA_30 DeaD_dimer AAA_28 FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: BCO31539
Position
1775669..1776517
AA seq 282 aa
MKLIIVSGLSGSGKSVALNTLEDLGYYCVDNLPVALLEPLARELTAARQTRAAVGIDARN
HRQDLSRFRDILAGLETQDIQVEIVFLQATDETLLKRFSETRRKHPLTSTDTTLADAIRG
ERNLLEPIASSATLHIDTTHTNLHQLRDLVQERLSDTRPDALSLLFKSFGYKHGLPDDAD
FVFDVRCLPNPHWVQGLRPLTGRDQAVIAYLEDQPPVDAMFQELCRFLDDWLPAFEKENR
RYLTVALGCTGGQHRSVYMAERLGKHFAGRYPSVLVRHRELS
NT seq 849 nt   +upstreamnt  +downstreamnt
ttgaaactgatcatcgtcagcgggctgtcgggctcgggcaagagcgtggccctgaacacc
ctggaagacctgggctactactgcgtggacaacctgccggtggcgctgctggaaccgctg
gcccgggagttgaccgccgctcgccagacgcgggccgccgtgggcatcgacgcccgcaac
caccgccaggacctgtcccgcttccgcgacatcctcgccgggctcgagacccaggatatc
caggtcgagatcgtcttcctgcaggccacggacgagaccctgctcaagcgtttcagcgaa
acccgccgcaagcacccgctgaccagcactgacaccaccctagccgacgccatccgcggc
gagcgcaacctgctcgaaccgatcgcgagcagcgccacgctgcacatcgacaccacccat
accaatctgcaccagctgcgcgatctggtgcaggagcggctctccgacacccggcccgac
gcgctgtcgctgctgttcaaatccttcggctacaagcacggactgcccgacgatgccgac
ttcgtcttcgacgtacgctgcctgcccaacccgcactgggtccagggcctgcggccgctc
accggccgcgaccaggcggtaatcgcctaccttgaggatcagccgccggtggatgccatg
ttccaggaactttgccgcttcctcgacgactggctgccggccttcgagaaggagaaccgg
cgctacctgaccgtcgccctcggctgcaccggcggccagcaccgctcggtatacatggcg
gaaaggctgggcaaacacttcgccggccgatatccttccgtgctggtccgtcaccgggag
ctgtcatga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (12)   

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