KEGG   Thiohalobacter sp. COW1: TspCOW1_28600
Entry
TspCOW1_28600     CDS       T08363                                 
Symbol
vfr
Name
(GenBank) cyclic AMP receptor-like protein
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
thic  Thiohalobacter sp. COW1
Pathway
thic02020  Two-component system
thic02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:thic00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    TspCOW1_28600 (vfr)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    TspCOW1_28600 (vfr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:thic03000]
    TspCOW1_28600 (vfr)
Transcription factors [BR:thic03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    TspCOW1_28600 (vfr)
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 Crp HVO_A0261_N TrmB MarR MarR_2 HTH_28 HTH_11 bAvd HTH_24 RepA_N DUF2196 RPA_C HTH_Cmi2_C HTH_36
Other DBs
NCBI-ProteinID: BCO32757
Position
complement(3035623..3036267)
AA seq 214 aa
MTMETKPIKSTGNASIDKFLEHCHRRRYPSKSVIIYAGDAPDVLYYIVDGSVTVLNEDEN
GHEIILAYLNKGDFFGEMGLFGENVTRSAWVRTRTECELAEISYAKFRQIAQEDAEILFA
LATQMAARLRTTSRKVTDLAFLDVTGRVARTLLDLCREPDAMTHPDGMQIRVTRQEIGRI
VGCSREMVGRVLKSLEEQGLITARGKTIVVFGTR
NT seq 645 nt   +upstreamnt  +downstreamnt
atgaccatggaaaccaagccaatcaaatccaccggaaatgcgtccatcgacaagttcctg
gagcattgccaccggcggcgctacccgtccaagagcgtcatcatctacgccggtgatgcc
cccgacgtgctctactacattgtggacgggtcggtgaccgtgctcaacgaggacgagaac
ggccacgagatcatcctcgcctacctcaacaagggggacttcttcggcgagatgggcctg
ttcggcgagaacgtcacccgcagcgcctgggtgcgcacccgcaccgagtgcgaactggcc
gagatcagctacgccaagttccgccagatcgcccaggaggatgccgagatcctgttcgcg
ctcgccacccagatggcggcacgcctgcgcaccaccagccgcaaggtcaccgatctggcc
ttcctcgatgtcaccggccgcgtggcccgcaccctgctggacctgtgcagggagccggac
gccatgacccacccagacggcatgcagatccgcgtcacccgccaggagatcggccgcatc
gtcggctgctcgcgcgaaatggtcggtcgggtactcaagagcctggaggaacagggcctg
atcacggcccggggcaagaccatcgtggtgttcgggacgcgctga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (18)   

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