KEGG T04125: 104808175

Tarenaya hassleriana (spider flower): 104808175

Entry

104808175         CDS       T04125

Name

(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22 homolog

K13100

pre-mRNA-splicing factor CWC22

Organism

thj Tarenaya hassleriana (spider flower)

Brite

KEGG Orthology (KO) [BR:thj00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:thj03041]
    104808175
Spliceosome [BR:thj03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    104808175
Complex C
   U4/U6.U5 tri-SnRNP related factors
    104808175

SSDB

Motif

Pfam:

MA3 MIF4G

Other DBs

NCBI-GeneID:

104808175

NCBI-ProteinID:

XP_010532078

Position

Unknown

AA seq 930 aa
MDRDEKRRAGISDEEGDKSSRRDKRGREREVNGEDDGSRILKRDGRERDDGEGRDRERSP
RNVRDRQDIERSRRGSNVRADSSSDDEEERRPRRGRRERPPSSDEDEDRERRRRVRVDKD
GDNEGMERERRRKDEEGEGQVSKNVEDRKMIHRVRRGSDDEEGELKGDRMETEEVEDGDE
RRGRKRSFRDREKQDREGIHRDGVRTDTSSDEEDDRERRRRDIRGRERRHRDDRVSDEDE
EGEIKRDRRGKERAGRRQVAGGIKRDRREKDVADGNRHPGSRRDSERHNDKGLRDEKERR
HRDGCDDEREKERTERKEDSRSSRKREERRDDMHKEDSKPKGQGQGQEANASDDPLALGR
SGGVYIPPFKLARMMKEVQDKSSVEYQRLTWDALRKSINGLVNKVNASNIKNIIPELFAE
NLIRGRGLFCRSCMKSQMASPGFTDIFAALVAVVNAKFPEVXKIVLQLKRAYKRNDKPQL
LAAVKFIAHLVNQQVAHEIISLELLTVLLENPSDDSVEVAVGFVTECGAMLQDLSPKGLH
GIFERFHGILHEGEIDKRVQFLIEGLFAIRKAKFQGHPAVRPELDLVEPEDQLTHEISLQ
DEINPEIALDIFKPDPDFLENEKKYEELKNSILGDESEDEDGSDAGSGDEDDNEEEESDE
EDEERTKINDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCIMLLEC
CSQERTYLRYXGLLGQCFCMINKVHQENSEKCFVQQYSMIHRLETNKLRNVAKFFAHLLG
TDALPWHVLAYNRLTEEDTTSSSRIFIKKLFQELSEHLGIRLLNERLQDPTMQDSFEAIF
PKDNLKNTRFSINFFTSIGLGGITENLREYLKNMPQLIMQQQKQASESESDSESGSSSAS
SSSSDSASDTLSSGSASKRVDRKRKRGRRG

NT seq 2793 nt +upstreamnt +downstreamnt
atggatagagacgagaagcgtcgggccgggatttcggacgaagaaggtgataagagttca
cgtagagacaagcgagggagggagcgtgaggttaatggtgaagatgatggaagcagaatt
ttgaagagagatgggagagaaagagatgatggcgagggaagggacagggagagaagcccc
agaaatgtgagggatagacaggacatagaaagaagccgcaggggcagtaatgttagagcg
gattcgtcttctgatgatgaggaagagagacggccgagaaggggtcgaagagaacgtcct
ccaagttcagatgaagatgaagacagagagagaagaagaagagtgagggtggataaagat
ggtgataacgaggggatggaaagggagagaaggcgtaaggatgaggaaggagaggggcaa
gtgtctaagaatgtagaagacaggaaaatgattcatagagttcgtcgaggttcagatgat
gaagaaggtgagctgaagggagataggatggaaacagaagaggttgaagatggtgatgag
aggagaggaaggaagagaagcttccgagatagggagaaacaggatagagaggggattcat
agagatggggtcagaacagatacatcatctgacgaagaagatgatagggagagacgcaga
agagatatacgaggacgagagaggagacatagagatgaccgagtatctgatgaagatgag
gaaggtgagattaagagagacagaagaggaaaagagagggcaggtaggagacaggttgct
ggtggaattaagagagatagaagggagaaagatgtggctgatggcaacaggcatcctggt
tcacgacgagattcagagcgacacaatgataagggacttagagatgaaaaggagaggaga
cacagagatgggtgtgatgatgaaagagaaaaggaaagaacggagagaaaggaagacagc
agaagttctaggaaaagagaagagagaagagatgatatgcataaggaggattcaaagccc
aaggggcaggggcaagggcaagaagccaatgcatctgatgatcccttggctttgggaagg
agcggcggcgtttacattcctccattcaaactcgcacggatgatgaaggaggtgcaagat
aagagcagtgttgaatatcagcgtctgacatgggatgctcttcgtaaaagtattaacggg
ctcgtgaataaggtgaatgccagcaacatcaagaatataatcccggagctgtttgctgaa
aatctcatcagggggaggggtcttttctgccgttcatgcatgaagtctcaaatggcatcg
cctggtttcacggacattttcgcagcactagttgctgttgtcaacgccaaatttcccgaa
gtangaaagattgtcttgcagcttaagagggcctataagcgtaatgacaagcctcaatta
cttgctgctgttaaattcatagcacatttagtaaaccagcaagtagctcacgagatcatt
tctttggagttgcttacggtgctactagagaacccgagtgatgacagtgttgaggtagct
gttgggtttgtgacagagtgtggtgctatgcttcaagacctttcaccaaaaggattgcac
gggatttttgagcggtttcatggtattcttcatgagggagagatagataagagagttcag
ttcctcatcgaaggattatttgccattaggaaagctaaattccagggtcacccggctgtt
cgtcctgaattggatcttgtggagcctgaagatcaattgacgcacgagatctctctccaa
gacgagataaatccagaaattgctctcgatattttcaaacctgatcctgacttcctcgag
aatgaaaagaagtatgaggaactgaagaatagtattcttggtgatgaatctgaggatgaa
gatggctcggatgctggttctggggatgaagacgacaatgaagaagaggaatctgacgaa
gaagacgaagaaaggacgaaaataaacgatgagacagagactaaccttgtgaatttgagg
aggacaatatatctgacgataatgtccagcgttgactttgaggaagctggtcacaagttg
ctcaagataaaacttgaaccaggacaagagatggagctatgcattatgcttctggaatgc
tgcagccaggagagaacttatctacggtactaaggtttgttaggacaatgcttctgcatg
atcaacaaagttcaccaagagaattccgagaaatgttttgttcaacagtactccatgatc
catcggctcgagacaaataagctgcgtaatgtggcaaagtttttcgctcatctgctaggc
acagatgctcttccttggcatgttcttgcctacaatcgtttaactgaggaggacaccact
tcatcatcccgtatcttcatcaaaaaacttttccaggaactgtcagagcatctgggtata
cggctgctgaacgagagacttcaagatccaacaatgcaggactcttttgaagctatcttc
cccaaggacaacctcaagaacacaagattctcaatcaacttctttacatctattggtctt
ggaggcattacagagaatcttagagaatacctcaagaatatgcctcagcttatcatgcaa
cagcagaaacaagcttcggaatctgaatcagattcagaatcaggatcttcatctgccagc
tctagttcttcagattctgccagcgatacattatcttccggttctgctagcaagagagtc
gacaggaagaggaaacgaggaagaagaggttga

All links

Gene (33)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (37)   

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