KEGG   Tarenaya hassleriana (spider flower): 104822003
Entry
104822003         CDS       T04125                                 
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10
  KO
K12818  ATP-dependent RNA helicase DHX8/PRP22 [EC:5.6.2.6]
Organism
thj  Tarenaya hassleriana (spider flower)
Pathway
thj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:thj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104822003
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:thj03041]
    104822003
Enzymes [BR:thj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     104822003
Spliceosome [BR:thj03041]
 Complex C
  Other components
   Step II factors
    104822003
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C AAA_22 DEAD HA2_N nSTAND3 AAA_19 ATPase AAA_30 PhoH ABC_tran T2SSE AAA_23 TsaE
Other DBs
NCBI-GeneID: 104822003
NCBI-ProteinID: XP_010551371
Position
Unknown
AA seq 703 aa
MPAMAQGELNSPAQSRKPNPKSPIHSFARRQKIAEHRKSLPIASVEKRLIEEVKKNDILI
IVGETGSGKTTQLPQFLYNGGFCREGKVIGVTQPRRVAAVTVAKRVAEECGVELGQKVGY
SIRFDDTTSSSTRIKYMTDGLLLREALLDPCLSRYSVIVVDEAHERTVHTDVLLALLKKV
HRARSKPANENGNERDGQKNDVLKGCQGRKLSPLKLIVMSASLDARVFSAYFGGARAVHV
QGRQFPVDILYTIHPESDYIDAALVTIFQIHLEEGPGDILVFFTGQEEIESVERLVQERL
QHLPEANRKLLAVPIFSALPSEQQMRAFAPAPEGFRKAILATNIAETSVTIPGIKYVIDP
GFVKARNYDPTKGMESLVVVPTSKAQALQRSGRAGREGPGKCFRLYPEREFEKLENSTKP
EIKRCNLSNVILQLKALGIDDIIGFDFIDKPSRSAIEKSLEQLWLLGALTRDCKLEDPVG
HQMARLPLDPIYSKALIMANQFNCLEEMLITVAMLSVESIFYDPRDRKDEARTAMKHFTN
IEGDHLTYVNVYRESNELLEKRKKADSGVTKTDKVLKKWCKENFVNNRSLNHARDVFRQI
RGHVEQMGFHVSSCGDDTLEFRRCLTASFFLNAALRQPDGTYRALASGETVHIHPTSVLF
RGKPECVIFNELMQTSKKYIRNITRIDSSWLIELAPHYYSSNP
NT seq 2112 nt   +upstreamnt  +downstreamnt
atgccagcaatggcgcagggagagctcaatagccccgcccaaagccgcaaacctaatccc
aagtctccgattcactcttttgccaggaggcaaaagatcgcggaacatagaaagtctctt
ccaattgcttcagtggagaaaaggctgattgaggaggtcaagaagaacgatattctgatt
attgttggtgaaaccggaagcggcaaaacaactcagttgcctcagttcctatacaatggt
gggttctgtcgggagggaaaggtgataggggtaacacaaccgagacgtgtggctgctgtc
acggttgctaagagggtagctgaagaatgtggtgtcgagttagggcaaaaggtcggatat
tccatcaggttcgatgacacaacttccagttcaacaaggatcaagtacatgactgatgga
ctattgttgagggaagcgctgttggatccttgcctttcgagatactcggtcattgttgtt
gatgaagcccatgagaggactgttcatactgacgttttgctagccttgctgaaaaaggtg
caccgggcaaggtcaaagcctgcaaatgagaatggaaacgagagagacggacagaaaaac
gatgtattaaaggggtgtcaaggcaggaaactatctcctttgaagctgatcgttatgtct
gccagtttggatgcacgtgttttctccgcctatttcggaggtgccagagctgttcatgtc
caaggtcgacagttccctgttgacatactctataccattcatcccgaatcagattatata
gatgcagccttggtcaccatatttcagatccatttggaggagggtccaggtgatatactc
gttttcttcaccgggcaagaagagattgaatccgttgagaggcttgtccaagaaagactt
cagcatttacccgaagccaaccggaagctactggcagttcccatcttttccgctctgcca
tcggagcagcagatgcgagcttttgccccggctccggaagggtttcgtaaggctattttg
gctacgaatatcgccgagacttctgttacgattcctggaatcaagtacgtgatagacccc
gggtttgtaaaagcacggaactatgatccaaccaaagggatggaatcattagttgttgtt
ccgacatcaaaagcacaagctctacaaaggagtggacgtgctggacgtgagggacctggg
aagtgcttccgtctatatccggagcgagaatttgaaaagctggagaattcaaccaagccg
gaaatcaagcggtgcaatctctctaatgtgattttgcagcttaaggctctgggtattgat
gatatcatcgggtttgatttcatagataagccttcaaggtcggcgattgaaaaatcattg
gaacagctgtggttgctgggcgcgttgacacgtgattgtaaattggaggatccggttgga
caccagatggcacggctaccattggatcctatttattcgaaagctttaatcatggctaac
caattcaattgcctcgaagaaatgctgatcactgtagcaatgctgtctgttgaatcaata
ttctatgaccctcgtgatcgaaaagacgaggcgagaacagcgatgaagcattttaccaac
atcgagggagaccacctaacttatgtgaacgtctatcgagaatccaacgagcttttggag
aagagaaagaaggcggacagtggtgtgaccaaaaccgacaaagttttgaagaaatggtgt
aaggaaaactttgtgaataacagatctttgaaccacgctcgagatgttttcaggcaaatc
cgggggcatgtcgagcagatgggttttcacgtgtcgtcctgcggagacgatacactcgag
tttcgcaggtgtcttaccgcatcgtttttcctcaacgctgccttgagacaacccgacggt
acatacagggcattggcgagtggcgaaacggtccatatccacccaacgtcggtactgttc
aggggaaagccagagtgtgtaatcttcaacgagctgatgcaaaccagcaagaagtacatc
cggaacataacgagaatagattcctcgtggttgatcgagctcgctccccattattactcc
tcgaacccgtga

  All links  
Gene (24)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (41)   

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