KEGG   Thioalkalivibrio sp. K90mix: TK90_2357
Entry
TK90_2357         CDS       T01174                                 
Name
(GenBank) transcriptional regulator, Crp/Fnr family
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
tkm  Thioalkalivibrio sp. K90mix
Pathway
tkm02020  Two-component system
tkm02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:tkm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    TK90_2357
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    TK90_2357
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tkm03000]
    TK90_2357
Transcription factors [BR:tkm03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    TK90_2357
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 Crp HVO_A0261_N MarR TrmB HTH_24 DUF977 MarR_2 HTH_11 HTH_28 SgrR_N HTH_36 RepA_N wHTH-PRTase_assc HTH_23 Rrf2
Other DBs
NCBI-ProteinID: ADC72847
Position
2477979..2478617
AA seq 212 aa
MNNPFVYRPAQPSPALERFLGYCHRRHYRKRTTIIHSGTVPDTLYYVVSGSVSVLGENNG
HELVLAYLNKGEFFGELGMFEDDPRSATVVTREDTETAEIPYTQFREIVQRDPEILMLLT
SQIATRLRQTSRKVMDLAFVDVTGRIAHTLLDLARQPDAMTHPDGMQLRITRQEIARIVG
CSREMAGRVLKDLEERGLITAHGKTIVVFGTR
NT seq 639 nt   +upstreamnt  +downstreamnt
atgaacaacccgttcgtctatcgcccggcacagccgtcgccggccctggaacgcttcctc
ggttattgccaccgccggcactaccgcaagcgcacgacgatcattcattccggcacggta
ccggatacgctgtactacgtcgtcagcggatcggtttccgtactgggcgagaataacggt
cacgaactcgtactggcctatctgaacaagggcgagttctttggtgaactcggcatgttc
gaggacgatccgcgttcggccacggtcgtcacccgcgaggataccgaaaccgccgagatc
ccctacacccagttccgcgaaatcgtgcagcgcgatccggagatcctgatgctgctgacc
agccagatcgcgacccgcctgcgccagacctcgcgcaaggtgatggacctggcctttgtc
gacgtgaccggccgcattgcccacaccctgctggatctggcccgccagcccgatgccatg
acgcacccggacggcatgcagttacgcatcacccggcaggagatcgcgcgcatcgtcggc
tgctcgcgcgagatggccggacgcgtcctgaaggacctggaggagcgtgggctgatcacc
gcccacggcaaaaccatcgtggtgttcggcacccgctag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (17)   
   Pfam (17)   
All databases (19)   

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