KEGG   Thiothrix lacustris: RCF98_16050
Entry
RCF98_16050       CDS       T09396                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
tlc  Thiothrix lacustris
Pathway
tlc00740  Riboflavin metabolism
tlc01100  Metabolic pathways
tlc01110  Biosynthesis of secondary metabolites
tlc01240  Biosynthesis of cofactors
tlc02024  Quorum sensing
Module
tlc_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:tlc00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    RCF98_16050 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RCF98_16050 (ribD)
Enzymes [BR:tlc01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     RCF98_16050 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     RCF98_16050 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: WML90468
UniProt: A0ABY9MPH5
Position
3304524..3305639
AA seq 371 aa
MNFTPDDHRYMARALQLARRGLYTTQPNPRVGCVIVRDGQIVGEGWHERAGEPHAEVHAL
RMAGEAACGATAYVTLEPCSHYGRTPPCANALVQAGVARVVAAMVDPNPLVAGKGLQMLQ
QAGITTAAGLLESEARALNPGFISRMERNRPYIRLKMAMSLDGRTAMESGESVWITGEAA
RRDVQFLRGQAGAILTGIGTVLADNPSLNVRLSAAELGISGEVRQPTRVVLDSALQFPLN
AAMLTLPGDILLYTCSADVQKIAQLEQAGAKVRCFSGNTLQLSDVMSALVEDGISEVHVE
AGATLGGALVEQGFADELVIYLAPHLMGSNARALFNLPHIAQMSERIPLEIRDIRAVGQD
WRIIASLQTRG
NT seq 1116 nt   +upstreamnt  +downstreamnt
atgaattttacccccgacgaccaccgttacatggcacgggcgctgcaactggcgcgacgc
gggctttacacgacccaacctaacccacgcgtgggttgtgtgatcgtgcgtgatgggcaa
atcgtcggcgaaggctggcacgaacgtgctggcgaaccacacgccgaagtccacgcctta
cgcatggcgggtgaagccgcttgcggagccactgcttatgtaaccctagaaccctgttcc
cattacgggcgcacgccgccgtgtgccaatgctttggtgcaagcaggtgtggcacgggtc
gttgccgcaatggttgaccccaacccgctggtggctggcaaaggtttacagatgctgcaa
caggctggtattaccaccgctgcgggattgctggaaagtgaagcacgcgctctcaacccc
ggtttcatttcgcgcatggaacgtaatcgtccctatatccgcttgaaaatggcgatgagc
cttgacggacgtaccgcgatggaatccggcgaaagcgtgtggatcacgggtgaagctgcg
cggcgggatgtgcaatttctacgggggcaagcaggcgcaatcctcacaggtatcggcaca
gtactggcggataacccttcgctcaacgtgcgcctgagtgccgctgagttggggattagc
ggtgaagtgcgccagcctacacgggtagtgctcgactctgcgttacaattccccttgaac
gctgccatgctcaccttgccgggtgatattctcctgtacacctgtagcgctgatgtgcaa
aaaatagcgcaactggaacaagctggggcaaaagtccggtgtttttccggcaacaccttg
cagctgtccgacgtcatgagtgccttggtggaggacggcattagcgaagttcacgtcgaa
gcgggggcaaccctcggcggtgcgctggtcgagcagggttttgctgacgaattggtgatt
taccttgcgccgcatttgatgggttccaacgcccgtgctttgtttaatttgccgcatatt
gcacagatgagtgagcgcattccgttggaaattcgtgatattcgcgcagtagggcaagat
tggcgtattattgccagcctgcaaaccagaggttaa

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