KEGG   Thiomicrospira microaerophila: JX580_05380
Entry
JX580_05380       CDS       T08259                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
tmh  Thiomicrospira microaerophila
Pathway
tmh00521  Streptomycin biosynthesis
tmh00523  Polyketide sugar unit biosynthesis
tmh00525  Acarbose and validamycin biosynthesis
tmh00541  Biosynthesis of various nucleotide sugars
tmh01100  Metabolic pathways
tmh01110  Biosynthesis of secondary metabolites
tmh01250  Biosynthesis of nucleotide sugars
Module
tmh_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:tmh00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    JX580_05380 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    JX580_05380 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    JX580_05380 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    JX580_05380 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    JX580_05380 (rfbB)
Enzymes [BR:tmh01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     JX580_05380 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 3Beta_HSD NAD_binding_4 RmlD_sub_bind adh_short Sacchrp_dh_NADP KR
Other DBs
NCBI-ProteinID: UQB43302
Position
complement(1124718..1125830)
AA seq 370 aa
MKILVTGGAGFIGSALVRHIIQDTPYQVVNLDKLTYAGNLLSVASVSDNSRYAFEQVDIC
DAEAVKRVFSQHQPDIVMHLAAESHVDRSITGPADFIQTNIVGTYTLLEQARIYWLKLRD
EKKRQFRFHHISTDEVYGDLPHPDDIQPSSGTGLSDLSLPLFTEQTAYAPSSPYSASKAA
SDHLVRAWLRTYELPTLVTNCSNNYGPYHYPEKLIPLTILNALKGEVLPVYGRGQQIRDW
LYVEDHVRALLLVATQGKLGETYNIGGHNEKRNIDVVKTICQILEKLAPSESNPNIDTYS
CEPGNASCYSELIKFVADRPGHDRRYAIDASKIERELGWIPQETFESGLEKTVQWYLDNQ
AWCQAIQAQA
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgaaaatcctcgttaccggtggtgccggttttataggttcagccctagttcgtcatatt
attcaagatactccttatcaggtggtcaatttagataagctcacttatgctggcaattta
ttatcggttgcttcggtaagcgataattcacgttatgcttttgagcaggttgatatttgt
gatgctgaagcggtcaagcgtgtttttagtcagcatcaaccggatattgtgatgcatttg
gccgctgagtcgcatgttgatcgttcaattaccggccctgcagattttatccaaaccaat
attgtcggcacttacaccttgttagagcaggctaggatttattggttaaaactgcgtgat
gaaaaaaaacgccaattccgttttcatcatatttctactgacgaagtttatggtgatttg
ccgcatccggatgacattcaaccttctagcggaacagggctatcagacttgagtctaccg
ctttttacagaacaaacggcttatgctcccagttcgccttattcggcaagtaaagccgcg
tctgatcatctagttcgcgcgtggttgcgcacctacgaactgccgaccttggtaaccaat
tgctcaaacaattatggtccttatcattatccggaaaaattaatccccttaacgatctta
aatgcgcttaaaggggaagtattgccggtatacgggcgcggtcagcaaatacgcgattgg
ctttatgtcgaagaccatgttcgcgccttactactggtagcgacccaaggcaaactgggc
gaaacctataatattggcggtcacaatgaaaaacgcaatattgacgtagttaaaacgatt
tgtcagatcttagaaaagcttgcgccttctgaatcaaaccctaatattgacacctattct
tgtgagccgggtaatgccagttgttatagtgaattgattaaatttgttgctgatcgaccg
ggtcacgatcgacgttacgcgattgatgccagcaaaattgaacgtgaactgggttggatt
ccacaagaaacctttgagtctggcttagaaaaaaccgtgcaatggtatttagataaccag
gcctggtgccaagccatacaggcacaagcatga

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