KEGG   Tuber melanosporum: GSTUM_00004730001
Entry
GSTUM_00004730001 CDS       T01282                                 
Name
(RefSeq) hypothetical protein
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
tml  Tuber melanosporum
Brite
KEGG Orthology (KO) [BR:tml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tml03041]
    GSTUM_00004730001
Spliceosome [BR:tml03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    GSTUM_00004730001
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    GSTUM_00004730001
SSDB
Motif
Pfam: MA3 MIF4G HEAT_5MP1_2 DUF5523
Other DBs
NCBI-GeneID: 9188365
NCBI-ProteinID: XP_002836572
INRA: GSTUM_00004730001
UniProt: D5G8C0
AA seq 910 aa
MDIDEADEVVVQSVIRLPSPSPPPSKRKRSPNSRSRSPRRRRSLPRRPSRLDSFGGVDSG
RARERDRQLNDRLRKLDVRAERTEKEVVEKPKFDAKAEYEKLLSMRSGGTYIPPARLRAL
QAQITDKTSKEYQRMAWEALKKSINGLINKVNVSNIKHIVPELFGENLIRGRGLYCRSIM
KAQAASLPFTPIYAAMTAIVNTKLPQVGELLLNRLVVQFRKAFKRNDKAVCLSSTTFIAQ
LCNQQVADEILAIEILMLLLNKPTDDSVEIAVGLMREVGAHLEEMAPRANNLVFEQFRTI
LHEAGIDKRVQYMIEVLFQVRKEKYKDNPIVKEELDLVEEEDQITHKTELDDEIDVQDGL
NIFKFDADWEEHEELYRKTKAEILGEGSDVGSDEEDEDESSDEEDEEKQEDKKMEILDQS
NTNLVNLRRTIYLTIMSSIDFEECCHKLMKITLPPGLENELCSMVIECCSQERTYTKFYG
LIGERFAKLNRFWTGLFEESFGTYYDTIHRYETNRLRNIARFFGHQLSTDALGWHVLSVV
HINEEETTASSRIFIKILFQDLAEAMGMKRLQERLKDPFLQEAFSGLFPKDNPRNTRFSI
NYFTSIGMGGVTEDMREHLKNNVPPPTAIVAPSARSESLSSRSSYSSRSGSSSSGRSRSR
SRSRSFSRSVSRSPLRTRDGGRKRGRSYSSSRDSRSRSHSYDSYSSRSRSRSYSRSRSRS
RSFSNTRPTKRARGRSYTRSITGSRSPSGSLTRSPSSRRSVSYTPPPRKSERARSRSRSY
SSAGSYRRRRSATYSSRSRSGSRSPTPPRKSDGNKSRSSRSPPAYRGRSYTPDRSQSRSR
SRSRGYGGKGSRYDFSGRNGNRSRGRERYRGDARPRDDDGGDGRRERPLAAGGGYGGRGG
GGRVRAADFL
NT seq 2733 nt   +upstreamnt  +downstreamnt
atggatattgacgaggccgatgaggtcgttgttcaatcagtaattcgtctgccctcccct
tcacctcctccgtcaaagcgcaagcgttcccctaattctaggtcccgatcaccccgtcgc
cgacgttcactccctcgtaggccatctcggcttgactcttttggcggtgtcgactctgga
cgcgctcgggagagggatcgtcaacttaatgatcgccttagaaagcttgacgttcgggcg
gagaggacggagaaggaagtagtggagaaaccgaaatttgatgcgaaggcagagtacgag
aagcttttgtctatgaggtctggcggtacatatatcccccccgcccgtctgcgagcgctc
caggcgcagattaccgacaagacgtccaaggaatatcaacgaatggcctgggaggctttg
aaaaaaagtatcaacggtttgatcaacaaagtgaacgtatccaatatcaagcatatcgtc
ccggagcttttcggcgaaaatcttatccgtggacggggtctctactgtcggtcaatcatg
aaggcacaagccgcgtctctaccatttacccctatctacgccgccatgaccgctatcgtc
aatacgaagcttccacaagttggagagttactcctgaatcggctagtggtacagtttagg
aaggctttcaagaggaacgataaggctgtttgtttgagcagtactacctttattgctcag
ctttgtaatcaacaggtcgcagatgagatcttagccattgagatactcatgttgcttctg
aataaacctacggacgactcggtggagatcgctgtagggttgatgcgtgaggttggggct
catttggaggaaatggcaccaagggcaaacaatcttgtttttgagcagttccggacaatt
cttcacgaggctggtatcgacaaacgtgtccagtatatgattgaggtgttgtttcaggtt
aggaaggaaaagtataaggataatcctatcgtgaaggaagagcttgatttggtggaggag
gaggatcagatcacgcataagacagagcttgacgatgagattgatgtccaggatggattg
aacattttcaaattcgatgctgattgggaagagcacgaggagttgtaccgcaagaccaag
gccgagattttaggagaggggagtgatgttgggagtgatgaggaagatgaagatgagagt
agcgacgaggaagatgaagagaagcaggaagacaagaaaatggagatcctggatcaatcc
aataccaatcttgtcaatctccgaagaaccatataccttaccatcatgtcttcaattgac
tttgaagagtgttgccataaacttatgaagattactctcccgcctggcctcgaaaacgag
ctctgttcgatggtaattgaatgttgttcccaagagcgaacctacacgaagttttatggt
ctcatcggcgagagatttgcgaaattgaaccgattctggactggtttgtttgaagagtcc
tttggaacatactacgatactatccatcgttacgaaaccaaccggcttagaaatatcgcc
cgctttttcggacatcagctctcgactgacgcattgggttggcatgtgctttctgttgtg
catattaacgaagaagagactacggcttcttctcgtatctttattaaaatacttttccaa
gacttggctgaagcgatggggatgaaaaggttgcaggaacggttaaaggaccctttcttg
caggaggcattctcagggctattccccaaagacaatccgcgaaacacgcggttctcgatc
aattactttaccagtattggtatgggtggggttactgaggatatgagagaacatttgaaa
aacaatgttccaccgcctactgccatagttgcaccgtctgctcgatcggagagcctcagt
tcgcgctcaagttactctagccgctctggaagctcgtcttccggaagatcaaggtccagg
tcaaggtctagatctttctcccggtcggtctcaaggtcaccattaaggacacgggatgga
gggcgaaagaggggccgtagttattccagctcccgagattctcgcagccgtagccatagt
tacgattcttactcttcgcggtcgagatcccgttcttattcccgctcgcgttcgcgctct
aggtctttttctaacactagacctacgaaaagggctcggggacgctcctacacccgtagt
ataactggctctaggtcgccgtccgggtctctgactagatccccctcgagtcgcagatca
gtttcttacaccccgcctccgcgtaaaagtgagagagcaaggtcgagatcgaggtcatac
tcttccgcagggagttatcgtcgccgtcgaagcgctacttattcctcgcgaagccgcagt
ggttcccgctcaccgacacccccgagaaagtcggatggaaataagagccggagctcacgc
tctcctcccgcctacaggggccgcagttatactccagaccgaagccaaagtcgaagccgt
agtagaagtaggggctacggtgggaaaggaagccgctatgacttctccggtagaaatgga
aatagatctagggggcgggagagatacaggggtgatgcgcgaccaagagacgacgacggc
ggcgatggcagacgcgaaaggcccctcgccgctggtgggggatatggcggaaggggagga
ggcgggagagttagagctgcagatttcttgtaa

  All links  
Gene (96)   
   RefGene (92)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   INRA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (103)   

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