KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00014316G001
Entry
GSTEN00014316G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tng00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GSTEN00014316G001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tng03019]
    GSTEN00014316G001
   03016 Transfer RNA biogenesis [BR:tng03016]
    GSTEN00014316G001
Enzymes [BR:tng01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     GSTEN00014316G001
Messenger RNA biogenesis [BR:tng03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     GSTEN00014316G001
Transfer RNA biogenesis [BR:tng03016]
 Prokaryotic type
  tRNA degradation factors
   GSTEN00014316G001
SSDB
Motif
Pfam: RNase_PH RNase_PH_C PNPase
Other DBs
NCBI-ProteinID: CAF97065
UniProt: Q4SQL7
Position
17
AA seq 556 aa
RKLEISSGRLARFADGSAVVQLGETSVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIP
TNYLRRELGTTDNEILTSRLIDRSVRPLFPAGYFYDTQVLCNLLAVDGVNDPDVLAINAA
SAALALSDIPWNGPIGAVRVGLVDGELLINPTRAEMSSSTLNLVVSGGPSSQVVMIEASA
ENVLQQDFCHAVKVGIKHTQQIIHAIQQLAREQKVTKRTPVKVFSAPADVVEYVRQVASE
SIYAVFTDYTHDKISRDEAINKVRLETEETIKDRFPQAEPFEVIESFNTVCKDIFRNLVL
NEYRRCDGRELTALRNISCEVDLFKPLHGSALFQRGQTQVLSSVTFDSLESSVKADIITT
ALSGIKDKNFMLHYEFPPYATNETGKVAGLNRRELGHGALAEKALRSVIPKEFPFTIRVT
AEVLESNGEYAVSETAPATSNKTFYSGFFVFLLFLSCQGPLPWPQYVEAAXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXPKICENIIHF
NT seq 1671 nt   +upstreamnt  +downstreamnt
aggaaacttgaaatatcttctggaagacttgccagatttgctgatggatcagctgtcgta
cagctgggcgagacctctgtgatggtgactgccgtgagcaaaaccaaaccttctccatct
caattcatgcctcttgtggtggactacagacaaaaagcagctgctgcggggagaatcccc
accaactacctgagacgtgagctgggcaccactgataacgagatcctcaccagcagactc
atagaccgatcagttcgaccactgttccctgctggttacttttatgacactcaggttcta
tgcaatctgctggcagtcgatggtgtcaatgatccggatgttcttgctatcaatgcagca
tcggctgctctggccctgtctgacatcccatggaatggacccataggagctgtacgtgtg
ggcttagtggatggggagttgttgatcaatcccaccagggcagaaatgagctccagcact
cttaacctggttgtgtccggaggtcccagcagtcaagtggtgatgattgaggcatctgct
gagaatgtactgcagcaggacttctgccatgcagtgaaagttggcatcaaacacacccag
cagatcatccatgccatccagcagctggccagagaacagaaggtcaccaaacgcacccca
gtcaaggtcttctcagctccagctgacgtggtggaatacgtgcggcaagtagcttctgag
agcatctatgctgttttcacagattacactcatgacaagatttcaagagatgaagctata
aacaaagttcgtctcgaaaccgaagagaccataaaagacaggttcccccaggctgagcct
tttgaagtcattgagtcctttaacactgtttgcaaggacattttccgcaacttagttctc
aatgaatacaggagatgtgatgggagggagttgactgctttgagaaacatttcctgtgag
gtggacctctttaaaccgctgcacggctcagctctgttccagagaggacaaacacaggtg
ctgagtagcgtcaccttcgactcccttgaatccagcgtcaaagcagatataatcaccact
gctttgagtggcatcaaagacaaaaactttatgcttcattatgaattcccgccatatgca
accaatgaaacgggaaaagtagcgggcctcaacaggagagagcttggtcacggagccttg
gctgaaaaagccctgaggtcagtcattcccaaggaattccctttcactatcagagtcact
gctgaggtgcttgagtccaatggtgagtacgctgtttccgaaacagcaccagcaaccagt
aataagacattttattcaggtttctttgtttttcttttatttctctcatgtcagggtcct
cttccatggcctcagtatgtggaggcagccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnngcccaaaatctgtgaaaacattattcatttctaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (6)   

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