KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00015369G001
Entry
GSTEN00015369G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K09097  aryl hydrocarbon receptor nuclear translocator
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:tng00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    GSTEN00015369G001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tng03000]
    GSTEN00015369G001
Transcription factors [BR:tng03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    GSTEN00015369G001
SSDB
Motif
Pfam: PAS PAS_3 PAS_11 HLH PAS_9 Per3-like_PAS-A PAS_4 bHLH_NCOA bHLH_INO2 CitX HAUS2 PAS_2
Other DBs
NCBI-ProteinID: CAF97872
UniProt: Q4SNB0
Position
8
AA seq 679 aa
IRCDDETTGSNNDKERFARLLDEDQSFADKEKLARENHSEIERRRRNKMTAYITELSDMV
PTCSALARKPDKLTILRMAVSHMKSLRGSGNTNSDGSYKPSFLTDQELKHLILEAADGFL
FVVSCETGRIVYVSDSVTPVLNQSQSDWFGSSLYDQLHPDDTEKLREQLSTVENNNTGRM
LDLKTGTVKKESQQSSARMSMGARRSFICRMRCGSCPVEPLSMNRLNFLRNRNRNGLGAP
KEGEPQYVVVHCTGYIKSWPPAGVSLNEDETENTQGSRFCLVAIGRLQVACCPGNTDINN
VSVPAEFISRHNCQGMFTFIDHRCVGAIGYQPQVTTETGSRLAARRRPELLGKNILELAH
PEDQGLLRDSFQQAVKLKGQVLSVMYRFRSKSRDWIWIRTSSFTFQNPFSEEIEYIICTN
VNMPGQPGAAAGPDHSKSLEKPELYPPLFQGSEQTKVLPPTPAPPAQIYTPNSNFPASRS
GDVYRPVSMPSQMMAQPGTAGQMLAQMSRQNSVAHSVTPSGTGAPLHGGPTPGGWPGAAG
GAGARPQFNNQQVAPHAAKTTSPPFPRMGGFGGGSSSSFEQMPTGASPTTTSGGNYPAIN
VRAGLSNNGYDGSQSGGQYPPRAAEAVWPQWQGQQNNAEQQPHAQGNQDMFPDVLSILDQ
PPNFNNDDFEIPIYSQFNE
NT seq 2040 nt   +upstreamnt  +downstreamnt
attaggtgtgatgatgaaacgacaggctccaacaatgacaaggaacgcttcgccaggttg
ttggatgaagatcagagttttgcagataaggaaaaactagcgagagagaaccacagcgag
atcgagaggcgcaggcgaaacaagatgacggcctacatcaccgaattgtccgacatggtg
cccacctgcagcgcactggcccgcaaaccagacaaactaaccatcctgagaatggccgtg
tctcatatgaaatccctgagggggagcgggaataccaactcagatgggtcgtacaagccc
tcgtttctcaccgaccaggagctgaaacatctcatattggaggcagcagatggttttctg
ttcgtggtttcatgcgaaactggacgcatcgtttacgtctcagactccgtgacgcccgtc
ctcaaccagtcgcagtccgactggttcggctcctccctctacgaccagctgcacccagac
gacacggaaaagctcagggagcagctctcgactgtggagaacaacaacacagggagaatg
ttggacctgaaaacggggaccgtgaagaaggaaagccagcagtcgtcggccaggatgagc
atgggagcccgccggtcgttcatctgcaggatgaggtgcggctcctgtccggtggaacct
ttatccatgaacagactcaacttcctcaggaatagaaacaggaacggcctgggtgcaccc
aaggaaggagagccccagtatgtagtcgtccattgtacaggatacatcaaatcctggccc
cccgcaggagtgtcgttaaatgaagatgaaacagaaaacactcaagggagtcgcttctgc
ctcgtcgccattgggagattgcaggtagcttgttgccctggtaacacagacatcaataac
gtcagcgtgccagctgagttcatctcgcgccacaactgccagggcatgttcaccttcata
gaccaccgctgcgtaggcgctatcggataccagccccaggtaaccaccgagaccgggagt
cggttagcagctcggcgccgcccggagctactggggaagaatatcctggagctggcacat
cctgaagaccagggcttactgagggacagttttcagcaggcggtgaagctgaagggccag
gtcctctccgtcatgtaccgattccgctccaaatccagagactggatctggattcggacc
agctccttcaccttccagaacccgttctctgaggagatcgagtatatcatctgcaccaac
gtcaacatgccgggccagccgggggcggcagcagggccggatcacagcaaaagcctggag
aaacccgagctctacccccctctttttcaagggtcggagcagaccaaggttctgcccccc
acccctgctcccccggcacagatctacaccccaaacagcaactttcctgccagtcgttcc
ggtgacgtgtacaggcccgtcagcatgccctcgcagatgatggctcagccaggcacggca
gggcagatgctcgcccagatgtcccgtcagaacagcgtcgcacattcagttaccccctcc
ggcactggcgcgcccctccacggaggacctaccccaggagggtggcctggagctgcaggc
ggagctggagccagaccacagtttaataaccagcaggtggcgccacatgcggccaaaacc
acatccccaccgtttccacgcatgggagggttcgggggcggctcctccagctcctttgag
cagatgcccaccggtgcgtctcccaccacgaccagcggcggaaactacccggccatcaac
gtgcgcgctggcctcagcaacaacggctacgacggctctcagtcggggggccagtacccc
ccacgggcagcggaggcagtgtggccccagtggcagggccagcagaacaacgcggagcag
cagccacatgctcagggaaaccaggacatgttccctgatgttttgtccatactggaccag
cctcccaacttcaacaacgatgactttgagattcccatctactcccagtttaacgagtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (15)   

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