KEGG   Tetraodon nigroviridis (spotted green pufferfish): GSTEN00026506G001
Entry
GSTEN00026506G001 CDS       T04346                                 
Name
(GenBank) unnamed protein product
  KO
K08873  serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
Organism
tng  Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tng00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    GSTEN00026506G001
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:tng01001]
    GSTEN00026506G001
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tng03019]
    GSTEN00026506G001
Enzymes [BR:tng01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     GSTEN00026506G001
Protein kinases [BR:tng01001]
 Serine/threonine kinases: Other
  PIKK family [OT]
   GSTEN00026506G001
Messenger RNA biogenesis [BR:tng03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Other surveillance factors
     GSTEN00026506G001
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     GSTEN00026506G001
SSDB
Motif
Pfam: SMG1 PI3_PI4_kinase FATC PDCD9 DUF7822 TssO
Other DBs
NCBI-ProteinID: CAG06224
UniProt: Q4RZF8
Position
3
AA seq 2188 aa
MLLLPYSSKLLWELRQDAATCLGLLCTVLSYEAESIFKWLFLKLTSSTRDEVKLLYLMAT
YHALEAAGERKAFSHIMQMVMTHLQSILENVDTPELLCQSVKCILQVAHCYPHVFSINFR
DTVDILVGWHIDHTQKQSVTQQVSGHFLFHFFSYFSILFFSNDVFGIFQAVSSNVLACLH
LPYLLAYKTGIFPRTFGLKLGGKNKQQGHVRNSTKERLTLKRMCPFPTCVCVCVVLLRPP
CLFIFLPSFFPPLPLSAAAPCGGIPPGNECVGVLLASVEPTGQLMEAVLVYGLDQLDCCQ
ACSSEYNLSVLILLTVTVDQINTKLPASFVEKLLAPKSKLLQLRFHRDKEVISAVHGVYQ
ALLSLKNIPTLEAAYKMVLGEIACALSSLTSALNSCGVDPAHNSSLCSSIQHPSFASLTL
PLDNAEFTLIFNLSTLTTIGNTKNSLIGVIFTLLSQNLLLVHSDLAVYYPAIQYAVLYTL
YSHCTRHDHFISSSLSSSPSLFDGAVISTVTTATKKHFSTLLGLLGGLLVKEHLYFETRK
LLLTWAQEICVLMKKSDTYSPLFSLSTFNKFCRGLLSNALNEDQSICLQTCHCIQVLSSS
LSNELLQSCVDVCRVQLVHSAVRVRQAFGKLLRTIPLDIALSNQCHPRMRDISLAVRHHM
SRAPSSTFHPQDFSDLISFILYGTLHRGGVLKRFFYTNRQTCQDWLTRIRLALMRVGLLS
GKPAVTIRHGFDLLTEFKNSSTQGPEVEVLLILLAEALCELHCPEAIQGLAAWSLFTTGR
SLSWLSSVALQAEGSVSGSINLRTDLNYIQALSRFEEGDLAECATQLELLPGEDYSSLSY
SKDKLDGHLTELCLTAVKFARKKGNIVLASRLLRKCGSGSNENEQEDDLSLTFRLLTLDG
TLGEKWGPELQIEKAKVLRAAVNVGVGEPDFVLGQLYQLSTYLAPEMAKSWAALASWAYR
WGRKDEDIALQQDDDEDDMVDVIWRQLTGSCPWLADMSQAVSDGLIRVWRHVVDRIFGLY
RVSCQAYFTFLKLNVGQGSSPSFFPVSIIQRHTSGKAYAACCVEWPKTPRILYSILPLWA
HYPLEQKPKMQIMMSLQQRAQKRASYLLHLDEISPRLLSMTKTEMALPGEVSASDAITIQ
SIGNTITILPTKTKPKKLFFMGSDGRNYPYLFKGLEDLHLDERIMQFLSIVNTMFTKINQ
QEQPHFHACHYSVTPLGTRSGLIQWVDGATPLFGLYKRWQQREAVLQAQKSYARSTAVMS
MVGYIIGLGDRHLDNVLIDMTTGEVVHIDYNVCFEKGKSLRVPEKVPFRMTHNIETALGV
TGVEGIFKLSCEQVLQIMRRGRETLLTLLEAFVYDPLVDWTAGGEVGFAGAVYGGGGQQA
ENKQSKREMERDITRSLFSSRVAEIKVNWFKNRDEMLAVLPQVEEAVEEYLVLQELLCQG
GKLQEKLQEEIAFLEGAENHPDHLILTLEQRYEILFAPQPSTAICQFLSSVELTLQHQIS
ETNDRVMRQAERLKAEGTTVSACEEQVQEIEHCITGFLPTIQVVYLANAVYTCLQELNTN
FRQIIFPEALCCMIKGEPTLESMLVEIEQLVEQSSDGLGLQGMVNNLQATTCFDKDGHNH
LLNIIRLIQPRNMEEPGQDTPKMSPGQMLLVAFDGMFTQLENAFAQLTDKVEAKDFGVES
KVLCKICFNMCLVLKMKVSLDELCKKAVEHSLASGRISQLLLNRATVLASSYDTAWKKLD
LLRRLDAHLEAAKASLQRSQLHVAMFQWQHEDILGPSNQPLSVSIPPRSIILSNMKKKLY
KLSQDEGAIVAVQEKLASLEASIEQRLKWAGGANPALAPVLQDFEMTITERRAIVARENQ
RTSQVTFLCSTILNFEGLRTRSAEALNMDAALFELLKRCQQTCSFAAKFSSSVSPIELQL
LHRLSPVLDLPIGSPDWLSCAQRQLEEQLNVEQNTRVEREQQLEVCAETLQVLVDSIKTI
LSHHNRQLADVKHLLRAMAKDEEAALADGEEVVYEGSVRQFLLEYKAWQDNNQLVLFTVV
QASGQPRSQEQLELLEEIPDTLKELYSQSERCTGLKTQPDSVSQNARKALPRNFGTPTDT
PPSTLVMNSKALNASPKRAIRDPKTGRAVQERNSYAVSVWKRVKAKLEGRDIDPNRRMSI
TEQVDFVIKEATNLDNLAQLYEGWTAWV
NT seq 6567 nt   +upstreamnt  +downstreamnt
atgctgttgttgccatacagtagtaagctgctctgggagttgcgtcaggatgcagccact
tgtcttggtctactctgcacggtacttagctatgaggctgagagcatcttcaaatggctc
tttctcaaattaacttcgagcactcgtgatgaggtgaagctgttgtacctcatggcaaca
tatcacgctttggaggctgctggagaaagaaaggccttttcccatatcatgcagatggtg
atgactcatttgcagtccattctggagaatgttgatacaccagagctactttgtcagagt
gtgaagtgtattcttcaggtggcccactgttacccgcatgtgttcagcatcaactttaga
gacacagtggatatattggtgggctggcacatagaccacactcagaagcagtcagtcacg
cagcaagtctcaggtcattttctttttcatttttttagttatttctctatcctttttttc
agtaatgatgtttttggtatttttcaggccgtcagttcaaatgttctagcatgtttacat
ctaccgtatttactcgcttataagacggggatttttcctcgaactttcgggctcaaattg
gggggcaaaaataaacaacagggacacgtacgcaacagcacgaaagaaagactgactttg
aaaagaatgtgtccgtttccaacttgcgtgtgtgtgtgcgtcgtcctgctccgccctcca
tgtctcttcattttccttccctctttttttccccccctccctctcagcgctgcagctcca
tgtggtggaattccaccaggaaatgagtgtgtgggtgtgttgctagccagtgtggaaccc
actggccagttgatggaggctgtcctggtctatggcctggaccagttggactgctgccag
gcctgcagctcagaatacaacctttcagtgctcatcctcctcactgtgacagtggaccag
atcaacacaaagctccctgcatcattcgttgaaaagttgctggctccaaaatccaagctg
ctgcagctgcgttttcatagagataaagaggtgatttcagctgttcatggtgtatatcag
gcactgttaagcctgaagaatattcctactcttgaagcggcatataaaatggtattgggt
gagatagcgtgtgctctctccagcctgacctcagcactgaattcctgtggtgtggatcct
gcccacaacagcagtctctgctccagtatccaacatccttcttttgcgtctctcaccctt
cctttggacaatgctgagtttaccctcattttcaacctcagcacccttacaactattggc
aacaccaagaattctctgattggggtgattttcacactgctcagtcaaaatcttttgttg
gtccactctgacttggcagtttactaccccgccatccagtatgctgtactctacacactc
tactcccactgcacaagacatgatcacttcatctcatccagcttgtcgtcttctccatca
ctatttgatggtgctgttatcagcactgtgaccacagcaacaaagaaacacttcagcaca
cttttaggcctgcttggaggtctcttggtgaaggagcacctctattttgagaccaggaag
ctgctgctgacctgggctcaggaaatctgtgtactcatgaaaaagtcagacacctatagc
ccccttttctctttgtccactttcaacaagttttgcaggggtctcctttccaatgctcta
aatgaagaccagagtatttgtctccagacctgtcactgcatacaggttctgtcttcatct
ttgtccaatgagctgttgcaaagttgcgtggatgtctgcagagtacagttggtccactca
gcagtgagagtaagacaggcctttggcaagctcctcagaaccattcctctggacattgcc
ttaagtaaccagtgccaccccagaatgagggacatttcactggctgtccgccaccatatg
agtcgagcaccaagcagcacctttcacccccaggacttcagtgacctcattagttttatt
ttgtatgggacactgcaccgtggcggagtattaaaacgtttcttttacacaaaccgtcag
acatgccaagattggctgacaagaatccgtcttgctctcatgagagttggtcttctttct
ggcaaaccagcagtaaccattcgccatggtttcgatttgctcacagagtttaagaacagc
agcactcagggtccagaggtggaggttcttctgatattgttggcagaagctctgtgtgag
ctacattgtcctgaggccatacagggcctggcagcatggagccttttcaccaccggtaga
agtctgagctggctgtcatcagtcgccctacaggctgaaggaagcgtttcaggaagcatc
aatttgaggacagatctaaactacatccaggctctgagccgctttgaggaaggtgatctt
gccgagtgtgcaactcagcttgagctgctgcctggagaggactacagctcactctcttac
agcaaagacaaactagatggccacctaacggagctgtgtttgactgctgtcaaatttgcc
aggaaaaaaggcaacattgtcctagcctcccgtttgctcagaaagtgcggcagtggatcc
aatgagaatgagcaagaggatgatctgagcctcacgttcaggctactgacgctggatggc
actctgggggagaaatggggaccagagctacagatagaaaaagctaaagttctgagagct
gcagtgaatgtaggtgttggagagccagactttgttttgggtcagctctaccagctgtca
acttacctggctccagagatggcaaagtcctgggcagccctagctagttgggcctatcgc
tggggtcggaaggatgaagacatagccctccagcaggacgatgacgaagatgacatggtg
gatgtgatctggcggcagctcactggctcatgcccctggcttgcagatatgagccaggct
gtttcagatggtctgatcagggtttggaggcacgtggtggatcgcatctttggcctctac
agagtctcatgccaggcctattttacgtttttaaaactcaatgttggacagggatcatcc
cccagcttttttcccgtctcaatcatccagaggcatacatccggcaaagcatatgcagct
tgctgtgtcgagtggcccaagactccccgcatcttgtactctatcctgccattgtgggct
cactatcctttggaacagaagcccaaaatgcagatcatgatgagcctgcagcagcgagcc
caaaagcgagctagctatttgcttcacctggatgagatcagtcctcgtcttctgtcaatg
accaagacggaaatggccctgcctggtgaggtgtctgcatcagatgccataaccatacaa
agcataggcaacaccattacgatcctaccaaccaaaaccaagcccaaaaagctcttcttc
atgggttcagatggacgaaactacccatacctctttaaaggtttggaggatttacatttg
gatgagcgcataatgcagttcctgtcaattgtcaacaccatgttcaccaagattaaccag
caggaacagcctcatttccatgcttgccactactctgtcaccccccttggaaccaggtca
ggacttattcagtgggtggatggagccacgccactgtttggcctctacaaacgctggcag
caaagggaggctgtgctccaggctcagaagtcctatgccaggtccactgctgtcatgtca
atggttgggtatatcatcggccttggtgaccgtcacctagacaatgtgttgattgacatg
accaccggagaggttgttcacatcgactacaatgtatgctttgaaaaagggaagagtcta
cgagtgccagagaaagtcccattcaggatgacccacaacatagagactgctctgggtgtc
accggtgtggagggcatcttcaagctgtcctgtgaacaggttcttcagataatgcgccgt
ggaagagagaccctgttaactctattggaggcctttgtctatgatcctcttgtggactgg
actgctggtggggaagtaggctttgccggtgctgtatatggaggtggaggccagcaagct
gaaaacaagcagagcaaaagggagatggagagagatatcacacgctcccttttctcatcc
agggtagcagagattaaggtgaattggtttaaaaatcgtgatgaaatgctggcagtattg
ccacaagttgaagaggctgtggaggagtacctggttctgcaagagctgctctgccaggga
gggaaactgcaagaaaaacttcaagaagaaattgctttcttggaaggagcggagaaccat
cctgaccatctgatccttaccttggagcaaagatatgaaatactgtttgcccctcaacct
tctactgctatttgtcagttcctgtcaagtgtggagttgactttgcaacaccagatttct
gaaaccaatgatcgtgtgatgcgccaggcagagcgcctcaaagctgagggaacaactgta
tcggcgtgtgaggaacaagttcaggagattgagcactgtattacgggcttcctccccact
atccaagtggtttatctggctaacgctgtatatacctgcttacaagagctaaacaccaac
ttcagacagatcatcttcccagaagctttgtgttgtatgataaaaggagagcctactctg
gagtctatgttggtagaaattgagcagctggtggagcagagctctgatggtcttggactc
caaggaatggtcaacaatctgcaagctactacatgttttgataaagatggacacaaccat
ttactcaacattataaggctaatccagcctcggaacatggaagaaccaggccaggacaca
ccaaagatgtccccgggacaaatgttgttggtagcctttgatggaatgttcacccagcta
gagaatgcatttgcacagctcacagacaaggttgaggccaaagactttggtgtcgaaagt
aaggtattatgtaaaatctgctttaacatgtgccttgttttgaaaatgaaggtctctttg
gatgagctttgtaagaaggcagtggaacatagcctggcttcaggtcggatttctcagctg
ctgttgaacagagccactgtgctagcctcctcctatgatacagcctggaagaaactagac
ctgttaagaaggctggatgcccacctggaggctgctaaagccagtctgcagagaagccag
ctgcatgttgcaatgtttcagtggcagcatgaggatattctgggtcccagcaatcagcct
ctaagtgtaagcattccacctcgctccatcattctcagcaacatgaagaaaaaattgtac
aagctgagtcaagatgaaggagccattgttgctgttcaggagaaactggcatcgctggag
gccagcattgagcaacgtctaaagtgggcaggtggagccaatccagcactggccccagtc
ttgcaggactttgagatgaccatcactgagagacgtgcaattgtggccagagagaaccag
cgcaccagccaggtcacatttctatgctcgactatccttaattttgaaggacttcgcact
cgatcagctgaggccctgaatatggacgctgcactctttgagttgttaaaacgttgccag
caaacctgctcctttgctgccaagtttagcagcagcgtctccccaattgagctccagctg
ctgcacagactgagtcccgtcctggacctgcccattggcagccctgactggctgagctgc
gcacaaaggcaactggaagagcagcttaatgttgagcaaaacacccgggtagagcgggag
cagcagctggaggtctgcgccgagacgctgcaggttctggtggattccataaagaccatc
ttgtcccatcacaaccgccagctggctgatgttaagcacctgctgagggccatggctaag
gacgaggaggcagctttggcggacggcgaagaggtggtatacgagggaagcgtgcgtcag
tttctgctggagtacaaagcatggcaggacaacaaccagctagtcttattcacagtagtc
caggccagtgggcagcctcgcagtcaggagcagctcgagctgctggaggagatccctgac
acactgaaggaactgtactcccaaagcgagagatgcactgggttaaagacccagccagac
tcggtttcgcagaatgctcgcaaggctctgccgcgaaattttggaactcccactgacacc
cctcccagcaccctcgtcatgaacagcaaagctctcaacgccagcccgaagagagccata
cgggaccccaaaactggaagagctgttcaggagagaaactcctatgcagtcagtgtgtgg
aaacgagtaaaagccaaactggagggcagagatattgatcccaacagaaggatgagcatc
actgagcaggtggactttgtcatcaaggaggctacaaatctggacaaccttgctcagcta
tatgaaggctggactgcctgggtgtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (9)   

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