KEGG   Tolypothrix sp. PCC 7910: HCG51_17365
Entry
HCG51_17365       CDS       T06504                                 
Name
(GenBank) RpoD/SigA family RNA polymerase sigma factor
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
toq  Tolypothrix sp. PCC 7910
Brite
KEGG Orthology (KO) [BR:toq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:toq03021]
    HCG51_17365
Transcription machinery [BR:toq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HCG51_17365
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r4_2 HTH_Mga HTH_23 HTH_28 IF2_N LexA_DNA_bind HTH_11 DUF7745 PF0610-like_N
Other DBs
NCBI-ProteinID: QIR38299
UniProt: A0A6G9SJF5
Position
complement(4358875..4359825)
AA seq 316 aa
MSSPSPDTVRVYLQEIGQYPLLTADQEIAYGRQVQQMMAIEQEKDTLSQKLNREPTLSEL
AAEVDKSEAELKQILKLGQRAKQKMVTANLRLVVSIAKKYQRRNLEFLDLVQEGAIGLQR
GAEKFDPNRGYKFSTYAYWWISQAITRAIAEKSRTVRLPIHITEKLNQIKKVQREQFQAL
GRFPTITEIAEALNLQPNQIREYLSASKQPFSLDLKVGDNQDTELNELLADEGISPSEQL
TQQLLRQDMENLLASLKPMQRQVLILRFGLEDDQQLSLAQIGQKLNVSRERVRQIQQQAI
NILRRQQPSIEQYLSV
NT seq 951 nt   +upstreamnt  +downstreamnt
atgtccagccccagtcccgacacagttcgcgtttatttgcaagaaattggtcagtatcct
ttgttaacagcagaccaagaaattgcttatggtaggcaggtacagcaaatgatggccatc
gagcaagaaaaagatacgctcagccaaaaattgaatcgcgaacctactttgagtgaatta
gctgctgaggttgacaaaagtgaagctgagttaaaacaaatactcaagctaggtcaacgt
gcaaaacaaaagatggtcacagcaaacctgcggctggtagtatcgattgccaaaaaatat
cagcgccgcaatttagaattcttggatttagttcaagaaggtgcaataggtttgcaacga
ggtgcagagaagttcgacccaaatcgtggctataagttctcaacttatgcatattggtgg
attagccaagcaattacaagagcgatcgcagaaaaatcccggactgtaaggctaccaatc
catatcaccgaaaaactcaatcaaatcaaaaaagtacagcgagaacagtttcaagcactt
ggtcgtttccccactattacagaaattgccgaagcgttgaatcttcaacccaaccaaata
cgagaatatctcagtgcttcaaaacagccattttctctagatttaaaggtgggagacaat
caagacacggaactcaacgaactgctagctgatgaaggtatttcacccagcgaacagcta
actcaacagctgttgcgtcaagatatggaaaatttgttagcttctcttaaaccgatgcag
cgtcaagtactgattttgcgcttcggactcgaagatgatcaacaactaagtttggctcag
attgggcaaaagttaaatgtcagtcgagaacgagtccgccaaattcagcagcaagcaatc
aatatcctgcgtcgtcaacaaccttctattgaacagtatttgtcagtttag

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (15)   

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