KEGG   Thrips palmi (melon thrips): 117642804
Entry
117642804         CDS       T08251                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog isoform X1
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
tpal  Thrips palmi (melon thrips)
Brite
KEGG Orthology (KO) [BR:tpal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tpal03041]
    117642804
Spliceosome [BR:tpal03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    117642804
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    117642804
SSDB
Motif
Pfam: MA3
Other DBs
NCBI-GeneID: 117642804
NCBI-ProteinID: XP_034237250
UniProt: A0A6P8YJP7
Position
Unknown
AA seq 1087 aa
MNEQNCLLNSQPTRNVSNPRFVRLCLLCCVCKEITKMSSPDFEGRGKNASQSEESDNYDS
NPSPPKKSKKKRNYDSEGPIPASKVRKVDASEEEEGEHKDDGSVHSGKDQVSKERLHDEK
SKSSRRVKDKDQEEERGKERDKGRDRDRDYDRYKDRRRKNYEEYERDPPANFERYWGAGP
KRSSYNDRDRRRRDDSDRDYDRYQDRRSGKDKGREVSGKVGPRYYGGKDDESKHVEENED
GKGPSSSSKDANKSEEVLSKPAEKKIVDMLTSRTGGAYIPPAKLRMMQAQITDKSSAAYQ
RIAWEALKKSIHGHINKVNTGNLATVIRELLQLNLVRGCGLLCRSIIQAQAASPTFTRVF
AALISVINSRFPQIGELLVKRVVINFKRGFRRQDKASCISSAIFIAHLVNQCVAHELLAL
EILVLLVETPTSDSVEVAIAFLKEVVDKLLEVAKKGTMAIQDMLRNILHEGTLDKRVQYI
IETMFQIIKVGGAKKLDDEQKQKEDEELLTLVEEEDQITHIINLDDAVDPQSILDVFKED
PQYEENEAAYAKLQKEILGSDSESGEEGSDEEEDSDEEDSDGEKKADKIIDNTETNLVAL
RRTIYLTIQSSLDFEECAHKLMRMQLKPGQEMEMCHMILDCCAEMRTYQKFFGLLAQRFC
MINKLYISPFQQIFCDSFATVHRLEINKLRNVAKFFAHLLHTDAISWEVLSSCRLTEEDS
TSSSRIFIKILFQELSEYLGLPKLNNRVKDATLQSAFEGLFPRDDPKNTRFAINFFTSIG
LGGLTDELREHLKTQPRTQTVPLPIQNAVDETTSSSSSSDSSSSSSSSDSSDSSDSEDEK
RKAKKKLKQKKGKADKSGKEGKKKGKKSETKSAEEMEESFEKRNKRDFDKGSKNQDDYAR
KNYSEKQHRMENEDWRQARKDVERGGRRDQHDRPDRRDQGDRPDRRNPNDRPDRRDTNER
PDRRDQDGPERRDVDRGERGNFGRGEKKSFGREEKRNVERGEKGDRREMQREPRRNEEFE
SRRGSQKESHMNEFDKRQSDREHEKDHREREKEKSRHTDKEKYQQYEKNGDKDRHRERER
EKERHYR
NT seq 3264 nt   +upstreamnt  +downstreamnt
atgaacgaacagaactgtctgttgaattcacagcccactcgaaacgtttcaaatcctagg
tttgtgaggttatgtttgttatgttgtgtttgcaaggaaataactaaaatgagcagccct
gactttgagggacgtgggaaaaatgcctctcaatctgaggaaagtgacaattatgacagc
aatccgtctcctccaaagaagtccaagaaaaagcgcaactacgattcagagggtcctatc
ccagctagtaaagtgcgcaaggtagatgccagtgaagaagaagagggagagcataaagat
gatggtagtgtgcatagtggcaaagatcaagtgtccaaagaacgacttcatgatgaaaaa
tccaaaagcagccgaagagtcaaggacaaagatcaagaagaggagcgaggtaaagagcgg
gacaaaggcagggacagagacagggattatgacagatacaaagatagacggcggaaaaat
tatgaagagtatgaaagagatccaccggcaaactttgaaaggtactggggtgctggacct
aaaagaagttcatacaatgaccgagatcgaagacgtagggacgactctgaccgtgactat
gatcgctaccaagatcggagatctggcaaggataaaggaagggaagtctcggggaaggtc
gggccacgatactatggagggaaggatgatgagtctaaacatgttgaagagaatgaagat
ggaaagggtccctctagctcttccaaagatgcaaataaaagtgaagaagtcctctcaaaa
ccagctgagaagaaaattgttgacatgctcacttcaaggacaggaggtgcttacattcct
ccagcaaaacttaggatgatgcaagctcaaattactgacaagtcaagtgcagcttatcaa
cgaatagcgtgggaagccttgaaaaagtcaattcatggtcacattaacaaagttaacaca
ggaaatttggcaactgtcattcgagaattactgcagttaaatcttgttcgaggatgtggt
ctcctatgcagaagtatcattcaggcccaggccgcttctccaacttttactagagtgttt
gctgccttgatttctgtcatcaattcaagatttcctcaaattggagaattacttgtgaaa
agggtggtgatcaactttaaacgtggcttccgccgtcaagacaaagcttcatgtatttca
tctgccatctttattgctcaccttgtaaatcagtgtgtggcccatgaactgcttgcctta
gaaattttggttctattggttgagacaccgacaagtgacagtgtagaggtggctatcgcg
ttcttgaaggaggttgttgataaattgttagaagttgctaagaagggcaccatggcaatt
caggatatgttacgtaacatattacatgaaggaacccttgacaaaagagtgcaatacatt
attgaaactatgtttcaaataattaaagttggtggagcaaagaaacttgatgatgaacag
aaacaaaaagaagatgaagaacttcttactttagttgaagaagaagatcagataactcat
attattaacttggatgatgctgtagatcctcagagcattttagatgtatttaaggaagac
ccccagtatgaggagaatgaagctgcatatgccaaacttcaaaaagaaattttgggtagc
gacagtgagtctggtgaagaaggttctgatgaagaagaggattctgatgaagaagatagt
gatggtgaaaagaaagctgataaaattatagacaacactgaaacaaatcttgtggctctg
cgaagaactatttacctgacaattcaatccagtttggattttgaggaatgcgcccacaaa
ctaatgagaatgcagttgaaacctggtcaagaaatggaaatgtgccacatgatactggat
tgttgtgcagaaatgcgaacttaccaaaagttctttggcctcttagcccagcgcttctgt
atgataaataaattgtatatctctccattccaacaaatattctgtgacagttttgccaca
gtgcaccgtttggaaattaacaaactaaggaatgtagccaaattctttgcccatctcctc
cacactgatgctatatcctgggaagttctttcttcatgccgtcttacagaagaggattct
acatcttcctcaagaattttcatcaaaatccttttccaggaactctcagagtacctggga
ttacccaagctgaacaatagagtcaaagatgccactctgcaaagtgcatttgaaggattg
tttccaagagacgatcctaaaaatactagatttgctattaatttcttcacctctattggt
ttgggaggccttacagacgagctgcgagagcatctgaagactcaacccaggacacagacc
gtacctctccctattcagaatgctgttgatgaaacaacaagctcttctagttcaagtgat
tccagttccagctcaagcagctctgatagttcagattcgtctgatagtgaagatgaaaag
aggaaagcgaagaaaaaactgaagcagaaaaagggaaaggctgacaagtcagggaaggaa
ggtaagaagaaaggcaagaagtcagagacaaagtcagctgaggaaatggaagaaagtttt
gagaaacggaataagagggacttcgacaaaggctctaagaaccaggatgattatgctaga
aaaaattattcagaaaagcagcatagaatggaaaatgaagattggagacaagcaagaaaa
gatgtggagagaggtggtaggagagaccagcatgataggcctgacaggagagaccagggc
gacaggccagacaggagaaacccaaatgataggcctgacagaagagacacaaatgagagg
cctgacaggagagatcaggatgggcctgagaggagggatgtggatcgaggggaaagggga
aattttggaaggggagagaaaaagagctttggtagagaggagaagcggaacgttgaaaga
ggagaaaagggagatcgcagagaaatgcaacgagagcctcgaagaaatgaagagtttgaa
tcccggcgaggttcacaaaaggaatcacatatgaatgaatttgacaagcggcagagtgac
agagagcatgaaaaggatcaccgtgagagagaaaaagaaaaatctcgtcatactgacaaa
gaaaaatatcagcaatatgagaaaaacggggataaggacagacaccgggaaagggaacga
gagaaggagaggcattatagatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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