KEGG   Trichomycterus rosablanca: 134315221
Entry
134315221         CDS       T09921                                 
Symbol
ctnnd1
Name
(RefSeq) catenin delta-1 isoform X1
  KO
K05690  catenin (cadherin-associated protein), delta 1
Organism
trn  Trichomycterus rosablanca
Pathway
trn04519  Cadherin signaling
trn04520  Adherens junction
Brite
KEGG Orthology (KO) [BR:trn00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    134315221 (ctnnd1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04520 Adherens junction
    134315221 (ctnnd1)
SSDB
Motif
Pfam: Arm ARM_ARMC5 HEAT HEAT_2 ARM_PUB HEAT_EZ Atx10homo_assoc SYS1_M ARM_UBP24_USP9X-Y
Other DBs
NCBI-GeneID: 134315221
NCBI-ProteinID: XP_062852342
Position
5:49904968..49962331
AA seq 930 aa
MEQCENAASLLASVREQEMQFERLTRALEEERRSVGQSGTLPRPLPTLQNGRLPCDAELE
RLKINDGYINGTQYRMLDPGHMVQETVMMEEGPQDMMPVISVETGEDGSTRRTETTVKKV
TKTTTTRTVIPSISDTLSLDGTGSVTGMSAYNAPIDRVYRQPHMDYPTATVPRNYHYGPP
GVYDDYRGGPPSETYASLTRGARMDERYRPMDGYRTLDPGYRVHSRPQLDPYAAQPQVGR
MGSAMEISGIPRFVPEPYGLEDDQRSLGYDEPDYGMGPSLHYSTMPRLGHHPPPPRRTGS
YEGTLDGDMSGAGDMYYWGGGAPLAQGERGSMASLDSTLRKGPAPTSWRQPELPEVIAML
NYRLDPVKSNAAAYLQHLTFKNDKVKSEVRRLKGIPALVSMLDNPKKEVHHAACGALKNI
SYGRDHDNKVAIKNCDGIPALVRLLRKARDQDLTDTITGTLWNLSSHDSVKMEIVDHALH
ALSDEVLVAHSGWDRGNVGADESCKPRHLEWETALTNTAGCLRNVSSERREARRKLRECT
GLVDSIMYIVQSQIDCKDVDNKLVENSVCLLRNLSYQVHQEIPGCERYLDTAPVNQGSVP
ANQKGGCFSARKGKDEWFSKGKKDDVDGNLDTIDIPKRNTPAKGYELLFQPDVARLYTSL
LVESKNPSVLEASAGAIQNLCAGRWTYGRYIRAVLRQEKGLSRMTELLSHENDRVVRAMA
GAMRNLAIDPRNRDLLGKHAVPNLVLNLPGGGQSQPVRALSEETVVSVLSTLAEVVGSSV
DAAKTLRSSQGIERLVLINKDGNRSDREVRGAGQVLQIVWGFKELRRTLEKDGWKKSDFM
VNLNPPNNTRSNGGYEDSSTLPLIDRGGKPDRDRNMIPMNDLRSDSYTTLDQRGRRNTFD
NTLEPADNDIQRGMYGERRGSMPLLDSYDG
NT seq 2793 nt   +upstreamnt  +downstreamnt
atggagcagtgcgagaatgccgcgtctctcctggcgtccgtgcgcgagcaggagatgcag
ttcgagcgtctgacgcgagctctcgaggaggagcggaggagcgtgggtcagtccggcacc
ctgcctcgccccctccccacccttcagaacggtcgtctcccttgtgatgcagagttagag
cggcttaaaataaacgacggatacataaacgggacgcagtacaggatgttggacccaggt
cacatggtacaggagaccgtcatgatggaggaggggccgcaggacatgatgccggtcatt
tctgtcgaaactggcgaggatggctccacgcgccgcacagaaactacagtcaagaaggtc
acgaagaccaccacgactcgcacggtcatcccctccatttctgatacgctctctctggat
ggtaccggctccgtcaccggcatgagtgcctataacgccccgatagaccgcgtctacagg
cagccacacatggactatccgaccgctacggtccctcggaactaccactacggcccgccg
ggggtatacgacgactaccgcggcggcccgccctccgaaacctacgccagcctcacccgc
ggggcccgcatggacgagcgctacagaccaatggacggctaccggacgctggacccgggc
taccgcgtccacagcaggccccagctggacccgtacgccgctcagccgcaggtgggtcgc
atggggagcgccatggagatctccgggattccacgcttcgttccggagccttacggtctg
gaggacgaccagaggagtttgggatacgacgagcccgattacggaatggggccgtccttg
cactacagcaccatgccccggctagggcaccacccaccccctccacgcaggactgggtcc
tacgagggcactctggatggggatatgagcggcgcaggggacatgtattactggggagga
ggagcaccgctggcgcagggtgaaaggggaagcatggcatcgctggacagcacgctgcgt
aaaggtcccgcgcccacgtcatggaggcagcccgagctacccgaggtcatcgccatgctg
aactaccgcctggacccggtgaagagcaacgccgctgcttacctccaacacctcacgttt
aagaacgacaaggtaaaatccgaggtgaggcgactgaagggcatcccggctctggtgtcc
atgctggacaacccaaagaaggaggttcatcacgccgcctgtggagctctgaagaacatc
tcgtacggtcgggaccacgataacaaagtagccatcaagaactgtgatgggattcccgcc
ctggtgcgcctgctgagaaaggccagagatcaggacctgaccgataccatcactggcact
ctgtggaacctgtcatctcacgactcggtgaagatggagatcgtggaccacgccctgcac
gccctgtccgacgaggtcttggtggcgcactctggctgggacagagggaacgtcggggcg
gacgagtcctgcaagccccggcacctggagtgggagacggctctgaccaacaccgccggc
tgcctgaggaatgtgagctcggagcggagggaagccaggaggaaactgcgagaatgcacc
ggcctggtggattccatcatgtacatcgtccagtcgcagatcgactgtaaagatgtagac
aacaagctggttgagaacagcgtttgtcttttgaggaatctgtcctatcaggttcaccag
gaaatccccggatgcgaacgctacctggacacggcgcccgtgaatcagggctccgtccca
gccaatcagaagggaggttgcttcagcgctcgcaagggcaaagacgagtggttttccaaa
gggaagaaagatgatgttgatggaaatttagacacaatcgacattccaaaaaggaacacg
cccgccaaaggttatgaattgctgttccagccagacgtggcacgactgtacacgtcactg
ctcgtggagagtaagaacccctctgttctggaagcttcggcaggagccatccagaatctg
tgcgcaggccgctggacctatggacgctatatcagggcagtgctgaggcaggaaaaaggc
ttgtccaggatgaccgagctgttgtctcatgagaacgaccgtgtggtcagagcgatggcc
ggggccatgaggaacctggctatcgatccacggaaccgggacctgctcggtaaacacgct
gtgcctaatctggtgttgaacctgccgggcggtgggcagagccagcccgtgcgagccctg
tcggaggagacggtggtgtcggtgctcagcactctggccgaagtggtcggctccagcgtg
gatgcagccaagaccttacgcagctcgcagggcatcgagagactggtgctcatcaataag
gacggtaaccgttcggatcgggaggtgcgtggcgccggccaggtcctgcagatcgtctgg
ggattcaaggagctgcggcgcacgctggagaaggacggctggaagaaatcggacttcatg
gtcaacctgaacccgcccaacaacacccgcagtaacggcggctacgaggacagcagcacc
ctgccgctcatagaccgaggagggaagccggacagagacagaaacatgattccgatgaat
gacttaagatcagactcctacactacactggaccagagaggaaggaggaacactttcgat
aacactctagaacctgcagacaatgacattcagagaggaatgtatggagaacggcggggc
tccatgcccctgctggactcttacgatggttag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (8)   
   RefSeq(pep) (8)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (9)   
   Pfam (9)   
All databases (27)   

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