KEGG   Triplophysa rosa: 130556011
Entry
130556011         CDS       T09216                                 
Symbol
cwc22
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
tros  Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:tros00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tros03041]
    130556011 (cwc22)
Spliceosome [BR:tros03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    130556011 (cwc22)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    130556011 (cwc22)
SSDB
Motif
Pfam: MA3 MIF4G PGA28-like_dom DUF7026
Other DBs
NCBI-GeneID: 130556011
NCBI-ProteinID: XP_057192632
Position
LG6:4384638..4409463
AA seq 1005 aa
MATESNESKTDINISPASEDESAAPGVKDLRRRTSCTSSSEDGDSDGDDRRRTAEGQHES
RPGLAQREGSGSREGSPRAGSPPARVSSRTRHRQGSSNSDSSEDDSDDGVIHRIKSSVTH
IRHTSDDESKNRQRSSSPDKDKTQRSRSRSRSRSRSRSPQDRYGRSRRSRERERDRDRYG
GRDRYERRSSRERDWEHRRRERSTSPAKSDNPPTEEPPVKKRKEAQDPILTRTGGAYIPP
AKLRMMQAQITDKSSLQYQRMSWEALKKSINGLINKVNVSNIGHIIQELLQENIVRARGL
LARSTLQAQAASPIFTHVYAAVVAIINSKFPQIGELILKRLILNFRKGYRRNDKQQCLTA
SKFVGHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAISFLKDCGLKLTEVSPRGINAIF
ERLRNILQESEIDKRVQYMIEVMFAIRKDGFKDHPIIPDGLDLVEEEDQFTHMLPLEDEY
NQEDILNVFKLDPNFLENEEKYKTIKREILDEGSSDSGDEADGSGDEDDDEEDEEAAAGE
DQEKVTIFDKTEVNLVAFRRTVYLAIQSSLDFEEXAHKLIKMDFPESQTKELCNMILDCC
AQQRTYEKFFGLLAGRFCLLKKDYMESFEAICQEQYETIHRLETNKLRNVARMFAHLLYT
DSIPWSVLECVKMSEDSTTSSSRIFVKILFQELCAYLGLPKLNERLKDMTLQPFFEGLFP
RDNPRNTRFAINFFTSIGLGGLTDELREHLKNAPKMIMTQTQDVESSDSSSSSSSSSESS
SSSDSSSDSDSSDSSSDSSSSSSSSSDSDSRRKKVSGKKKKKNKDKSSSKASNQRSPLEE
RPSKRLENQRQDGSDEDRRRSENHQRDSHRRGRAGESPPARQRGDEERARGHEERARGHK
DQQHHRHGQDCEDKQQDLRRNKDNNRSGSPAGRDKDRRRSREKEPLRRSRERSKSQERSR
NEIDSRDSYRNGLERADKENRRSHRYSETRRKVEKGRDGSPRSHR
NT seq 3018 nt   +upstreamnt  +downstreamnt
atggcgaccgagtcaaacgagtccaaaacggatattaatatcagtcctgcgtctgaagac
gagtctgccgccccgggagtaaaggatctgcgtcggaggacatcctgcacaagttcatct
gaggatggagacagtgatggtgatgaccgcaggaggactgctgagggccagcatgagagt
cgtcctggattggcccaacgtgagggatctggttccagagaggggagtccacgagctggc
agccccccggcgagggtatcctccaggaccaggcacaggcaagggtccagcaactcggac
agtagtgaagatgacagcgatgatggtgtaattcacaggataaagagcagtgtcacacat
atcaggcatacatctgatgatgagagcaaaaacagacaaagaagctcctcaccggacaag
gataaaactcagaggtcaagatctcgctccagatctcgctcaagatcccgctctcctcaa
gatcgctatggaagaagtcgtaggtccagggagcgcgagcgagacagagatcgctacgga
ggccgtgatcgttacgagcgccgctccagcagagagagggattgggaacacaggaggagg
gaaaggtcgacttcaccagccaaaagtgataatcctcccacagaggagcctccggtgaag
aagaggaaggaggctcaggaccccatcctcacccgcaccggtggggcctacatcccaccg
gccaaactgcgcatgatgcaggctcagatcactgacaagagcagtttgcagtatcaaaga
atgagctgggaagccctgaagaagtccatcaatggtctgatcaacaaagtcaatgtttcc
aacatcggccacatcattcaagagcttctgcaggagaacatagtgagggccaggggtctt
ctggctagatctacgcttcaggcccaggccgcctctcccatcttcacccatgtgtacgct
gctgtggtggccatcattaactccaagtttcctcagattggggaactcatcctcaagagg
ctcattctcaatttccggaaaggttacaggaggaacgataaacaacaatgtctcacagca
tccaagtttgtgggtcatctcatcaaccagaatgtggctcatgaagtcctgtgtctggag
atgttgaccctgctgttggaaagaccaactgatgacagcgtagaggtggccattagcttt
ctaaaagattgtggtcttaaactgaccgaggtctccccccgtggcatcaatgccatcttt
gagcgtctgaggaacatcttgcaagagtcggaaatcgacaagcgtgtgcagtacatgatc
gaggtcatgtttgccatcaggaaggatgggtttaaggaccaccccatcattccagatggg
ctcgatctggtggaggaagaggaccagttcacacacatgctccctctggaagacgagtac
aaccaagaagacatcttgaatgtcttcaaattggatcccaactttctggagaacgaagag
aagtacaagacaattaaacgagaaatcctcgacgagggaagcagcgactctggcgatgag
gctgacggcagcggtgatgaagatgatgatgaggaagatgaagaggcggcggctggtgaa
gaccaagagaaagtcaccattttcgacaagacagaggtgaacctggtcgccttccgccga
acagtttacctcgccattcagtcaagcttggacttcgaagaatgagcccacaagttaata
aaaatggatttccccgagagccaaacgaaagagctgtgcaacatgatcctggactgttgt
gcccagcaaagaacatacgagaagttcttcggccttctcgctgggaggttttgcctgttg
aagaaagattacatggagagctttgaagccatctgtcaggagcagtacgaaaccatccac
cgtctcgaaaccaacaaactgcgcaatgtcgctcgaatgttcgctcatctgctctacacg
gactccattccatggagtgtccttgaatgtgttaaaatgagtgaagactcgacaacgtct
tccagtcgaatctttgtgaagattttgttccaggagctttgtgcttatttgggtttgcct
aaactgaacgagagacttaaggacatgacgttgcagcctttctttgagggtctgttccca
cgtgacaatccgaggaacacgagattcgccattaatttcttcacatctattggtctcgga
ggtctcacggatgagctgagagaacatctgaagaacgctccaaagatgatcatgacccag
acacaggacgtggagtcatcggattcttcctcttcttcctcatcgtcttcagaatcctcc
tcatcctcagactcttcttctgacagtgacagcagcgattcgtccagtgactcctcctcc
agcagcagcagctcttcagactctgactcgagacgcaagaaggtctcaggcaagaaaaaa
aagaagaacaaggacaagagctccagcaaggcatctaaccagcgttcccctctggaggag
cgaccgagcaagaggctcgagaaccagcggcaagacggaagcgacgaagaccgccgcaga
tccgaaaaccaccagagagattcccaccgcaggggacgtgcgggggagtcacctcctgct
cgacaacgaggagacgaggagcgtgcaagaggacacgaggagcgtgcaagaggacacaag
gaccagcaacatcacagacacggccaggattgcgaggacaagcagcaggatttgcgcagg
aacaaggataacaacagaagcggttccccagcgggcagggacaaagacagacggagaagc
agggagaaggagcctctgcggaggagcagggaaaggtcgaagtcgcaggagaggagccgc
aatgagatcgactccagggactcctacaggaacggcttggagagggcggacaaagagaac
aggcgttctcacagatacagcgaaaccaggaggaaggtggagaaaggcagagatggatcg
cctaggagccacagatag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (8)   

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