KEGG   Trichinella spiralis: Tsp_03537
Entry
Tsp_03537         CDS       T01609                                 
Name
(RefSeq) poly(A) polymerase gamma
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
tsp  Trichinella spiralis
Pathway
tsp03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Tsp_03537
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tsp03019]
    Tsp_03537
Enzymes [BR:tsp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     Tsp_03537
Messenger RNA biogenesis [BR:tsp03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     Tsp_03537
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind UQCC2_CBP6 NTP_transf_2 MTPAP-like_central CFAP143
Other DBs
NCBI-GeneID: 10909769
NCBI-ProteinID: XP_003379888
Position
Unknown
AA seq 923 aa
MQKRSVTVRIFIRRDGVFESTYCITDRIIMYRKFLQLCNRWPIDKDKVTSGRDLGSRIRE
EVVSRFRQGELTKFPSEAYCDEIFEALREISDDKHRSDNPVPYETAVFQKTLSECRELTS
DDSYANVEQSLLQKMKKKVFGWLPYSSPQIFAVRLALRALFLQAAYFFNENSSSSYDADF
VGSLPLTYVTPVAYPSVLMVTTEEETEQYGITAPISMADPTELDLRQSEELERVLHEYGL
FESDAELTHRMEVLRKVNLLFRQWIRDLSIQRNMPPDVADSVGGKIFTFGSYRLGVHTRG
ADIDTLCVAPRHILREDFFTSFKDLLKSQPEVSECRPIEEAFVPVIKLKFDGIELDMVFA
RLALKEVPENQKLDDDELLRNLDVKCIRSLNGCRVTDEILNLVPNKETFRLTLRAIKFWA
KRKKGVYSNVVGFLGGVSWAMLVARTCQLYPRAAPNVLVNKEWPKPVLLKNSITSQNHGY
IGFQELIWDPRVKQSDRYHLMPIITPAFPQQNSTFNVSSTTRSILQKFLHEGFLVSTEVI
CKGLSWPKLFEPSNFFVKYKHYIVISCFAATRADLITWSGLVESKMRYLIGQFEHNTGVL
LAHVNPEQFSPLEEHGDGVESFWVVGLEMNKEGIGAKNIDLTSDIQSFVDSIMRQALNSD
VWRQGMKVEAKYRRRRELTRILPLSVLNQNRDPMTVVRGRFKKSFEPQAAQNAATNAAAG
AAAVESTSRSDIISDSNNGPTTSLRSESSASVEDTSTTDGTFSNSDANTNTGECSPKTLL
GKRAGQEGSAFIVPPEKTSTSADMPTQSSFESHDVNLENSTINTANLQAVEESCPQCEKD
RLLYVHDEGKIQYRRVIMQYKSVVFTYLQLYCMRCKSGGDEMHYPCTTNFCSQTYSNKIT
STLPNKAIVHLASKLLFKVYLLK
NT seq 2772 nt   +upstreamnt  +downstreamnt
atgcagaaacgaagcgttactgtaaggattttcatcagacgcgatggggtattcgagtca
acgtattgcattactgacaggatcatcatgtataggaaatttttgcaactttgcaatcgg
tggcccattgacaaggacaaggtaacttcggggcgtgatttgggttctagaattcgtgaa
gaagtggtttcgagatttcgtcaaggtgaactgacaaaattcccctcagaagcttactgc
gatgaaattttcgaagcgcttcgtgaaatttctgatgataagcatcgctctgataatcca
gttccatatgaaactgctgttttccagaaaactttgtctgaatgccgcgaacttacttca
gatgattcctatgctaatgttgagcaatctttactgcagaagatgaaaaaaaaagttttt
ggttggcttccgtattctagtcctcagatatttgccgtacggttagcactgcgtgcatta
tttttgcaagctgcatacttttttaacgagaacagttcttcttcttatgatgctgatttc
gttggatcgctgcctttgacctacgtaacgcctgtagcatacccgtcagttttaatggtg
actactgaagaagaaacagagcaatatggaattaccgctcccatttcaatggctgatcct
acggaattggatctacggcagagcgaagagttggagcgtgttctgcatgaatatggttta
ttcgaaagtgatgctgagcttactcatcgaatggaagttttgcgcaaagttaatttgttg
tttcgacagtggatacgagatttgagcattcagcggaacatgcctccagatgttgcagat
tcagtaggcggaaaaatctttacttttggatcgtatcgcttgggtgttcatactcgagga
gctgatattgatacactctgtgttgcaccacgtcatatactacgagaagactttttcacc
tcatttaaagatcttctgaaaagtcagcctgaggtcagcgaatgtcgtcctattgaagaa
gcatttgtgcctgtgattaaattaaaatttgatggaattgaacttgacatggtgtttgct
cgtttggcattgaaagaagttcctgaaaatcagaagttggatgacgatgaacttttgaga
aatttagacgtgaaatgcattcgcagtttgaatggttgtcgagtaactgatgaaattttg
aatttggtaccgaataaagaaacatttcgattgactttgcgcgctataaaattttgggct
aagcgtaaaaaaggagtgtattctaatgtagttggatttcttggcggtgtatcatgggcc
atgctagtcgctcgaacttgtcagctgtatccgagggcagctcctaatgtattggttaat
aaggagtggccaaagccagttttgttgaaaaattcgattacatctcagaatcatggctac
attggttttcaagaattaatctgggatccacgggtaaaacaaagtgatcgttatcactta
atgcccattataactccagcgttccctcaacagaattctacgtttaacgtctcatctact
actagatcaatcttacagaaatttttgcacgaaggtttcttggttagcactgaagttatt
tgtaaaggactatcttggcctaaactttttgaaccttcaaattttttcgtcaaatacaag
cattacattgtgatcagctgctttgctgcaactagagcggatctgataacctggagtggt
cttgttgaatcgaaaatgagatatttgattggtcagtttgagcataatactggcgttctt
ttggcgcatgtcaatccggaacagttttctccattagaagagcacggagacggagttgag
tcgttttgggtagttggcctggaaatgaacaaagaaggcattggtgcgaagaatattgat
ttgacgtcggacattcaaagctttgttgacagcataatgcgtcaagctttgaattctgac
gtttggaggcaggggatgaaagtggaagcaaaatatcgtcgacgtcgcgaattgactcgt
attttaccattgtctgttttaaatcagaatcgagatccaatgacagtggttcggggacga
tttaaaaaatcttttgaaccccaagctgcacagaatgctgcgaccaatgcggcggcaggt
gctgcagctgtggaatcgacttctagatcggatattatttcagatagtaataatggacca
acgacatctctgcgttctgaaagttcagcatcagtggaagatacaagtacaactgatggc
acatttagcaacagtgatgcaaatacaaacacgggagaatgcagtccgaaaacgttactc
ggaaaacgtgcaggccaagagggaagtgcttttattgtccctccagagaagacatctacc
tctgcggacatgcccacgcagagcagttttgaaagtcatgatgtaaatttggaaaattcg
actataaacactgctaatctgcaggcggtcgaagaatcgtgtccgcagtgcgaaaaggat
cgtcttctttacgttcatgatgaaggaaaaatccaatatcgtcgtgtcatcatgcaatac
aaaagtgttgtttttacgtatttacaattatactgtatgcgatgtaaatctggcggtgat
gaaatgcattatccttgtacgaccaatttctgttcgcagacttacagtaataaaataaca
agcacactacctaataaagcgatcgtgcatttagcttcgaaattgttattcaaagtatac
ttgttgaaatga

  All links  
Gene (20)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (29)   

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