KEGG   Trichinella spiralis: Tsp_05710
Entry
Tsp_05710         CDS       T01609                                 
Name
(RefSeq) nucampholin-like protein
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tsp03041]
    Tsp_05710
Spliceosome [BR:tsp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    Tsp_05710
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    Tsp_05710
SSDB
Motif
Pfam: MA3 MIF4G Cnd1
Other DBs
NCBI-GeneID: 10913534
NCBI-ProteinID: XP_003372068
Position
Unknown
AA seq 701 aa
MPQALVGMKDNCSTKRGNCTLFDLNVKMYYYQNHSMSVDAEEDGTDLSSRKLVSESSDAK
HSSKGRHRRRRSSSFDDSAPRGKVKHRRHEKSKDYSRDEREHRSTENRRKYHSNRERRSS
DEGNGSRNHHHSDRQRHKQRRRDHDTKIDRNEEKSDLKSTSTQGAVKDGAAMLAEWRKRK
QASGCKAGGAYITPSRLKQMQDKLQDKNSYIEEYQRLSWERLKKIIGGQINRANVDNIVV
VIRTLLSANILRGKGAFCRSLLQAQAYSPRFSNVYAALVAVVNSKFPSIGELLLRRVINQ
FKRNFRRQDAAAAVSSCKLIAHLINQNVVHEVLALELLTCMLENPTEESVEMAVEFLREC
GAKLTELTPRGMNAVFDRLRSILHESDIRDRVQYMIETIFQIRKDKFAVRFANPPIIEGL
DLVEEDDEITHTISLDDEFDNEDLLNVFQFDPDFQKNEEKYEEIRAELLGSDESGDEEEE
EDAEVEDESEKKTTKIVDMTETNLVAFRRTVYLTIQSSLDFQEAITKLLKMEIRPEFELE
MCHMILDCCAQQRTYEKFFGLMAERFCILKKSYMEHFEQMFRDIYGTVHRFELTKLRNTT
KMFAHLLYTDAISWTVLSVIKLNEDDTTSSGRIFVKILFQELAEYMGLDSLYERIEDATL
QPAFEGLFPRDNPRHTRFSINFFTSIGLGGLTIGLREHLKA
NT seq 2106 nt   +upstreamnt  +downstreamnt
atgccacaagcgcttgttggaatgaaagataactgctctacaaaacgtggaaattgtacg
ttatttgatttaaacgttaaaatgtattattaccaaaaccatagtatgtctgtcgatgct
gaagaggatggtaccgatttgtcgtcgagaaagctcgtttctgaatcttcagatgcaaaa
cattcatcgaaaggccgacatcgtcgacgccgaagtagtagttttgatgattctgctcct
cgtggaaaggtgaagcatagacgtcatgagaaaagcaaggattattcaagagatgaacgc
gaacaccgttcgacagaaaacagaagaaaatatcactcgaatcgggaacgtcgatcaagc
gatgaaggtaatggcagtcgtaatcaccaccacagtgaccgacagcgtcataaacaacgt
cgccgtgatcacgatactaaaattgacagaaatgaggagaaaagtgatttgaaaagtaca
tccacacaaggggcagtgaaggatggtgcggctatgttggccgagtggagaaaacgtaaa
caagctagtggatgtaaagctggtggagcgtacatcacgccttcacggttgaaacagatg
caggacaaattacaagacaaaaattcgtacatagaagaatatcaacgtctttcgtgggaa
agattgaagaaaattatcggagggcagatcaatcgtgctaacgttgacaacatagttgtc
gtaattcggacattgctttcggcgaatattcttcgtggaaaaggtgcgttttgccgttct
ttactccaagcgcaagcttattcacctcgatttagcaacgtctatgcagcactggtagct
gttgtgaattcaaaatttccaagtattggcgaattattattacgtcgagtaatcaatcag
tttaaacgtaattttcggcgtcaagatgcagcggcagcagtttcatcttgtaaattaatt
gctcatcttatcaatcagaatgttgttcatgaagtgttggctttggaattgttaacatgc
atgttggaaaatccgaccgaagagtctgtcgaaatggcggtcgaattcttacgagaatgt
ggtgcaaagttgactgagttgactccaagaggcatgaatgctgtatttgatcgcctgcgt
tctattttacacgaaagtgatattcgagatcgtgtccaatatatgattgagacgatattt
caaattcgaaaggataaatttgctgtacggtttgcgaatcctccgataattgaagggctg
gatttagtagaagaggatgatgaaatcacgcataccatttctcttgatgatgaatttgac
aacgaagacttattaaacgtgtttcaatttgatccggattttcagaaaaatgaagaaaaa
tatgaagagatacgtgctgaactgttgggaagtgatgagagcggtgatgaagaagaagaa
gaagatgcagaagtggaggacgaatcggagaagaagacaacgaaaattgttgatatgaca
gaaacaaatcttgttgcttttcgtcgtacagtttatttaacgatacagtcctctttggat
tttcaagaagcaataacaaagttgttgaaaatggaaatcaggccagaatttgaattggaa
atgtgtcacatgatattggactgttgtgcccagcagcgtacgtatgaaaagttttttgga
ctcatggctgagcgattctgcattttaaaaaagtcctacatggaacattttgagcaaatg
ttccgagacatctacggtactgtgcatcgttttgaattaacaaaattgagaaacacaacg
aaaatgtttgctcatttgttgtacactgacgctatatcttggacggttttgtctgtaatc
aagctgaacgaagatgatactacttcatctggacgaatttttgttaaaattttatttcaa
gaattggccgaatatatgggcttggacagtttgtacgaacgtatagaagatgcaactttg
cagccagcatttgaagggttgttccctcgtgacaatccacgccatactcgtttttccatt
aatttttttacttcaattggtcttggtggcctgacaattggtcttcgtgaacatttgaaa
gcgtaa

  All links  
Gene (24)   
   RefGene (21)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (29)   

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