KEGG   Thamnophis sirtalis (common garter snake): 106550438
Entry
106550438         CDS       T06107                                 
Symbol
CWC22
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
tsr  Thamnophis sirtalis (common garter snake)
Brite
KEGG Orthology (KO) [BR:tsr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tsr03041]
    106550438 (CWC22)
Spliceosome [BR:tsr03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    106550438 (CWC22)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    106550438 (CWC22)
SSDB
Motif
Pfam: MA3 MIF4G
Other DBs
NCBI-GeneID: 106550438
NCBI-ProteinID: XP_013923826
UniProt: A0A6I9YI03
Position
Unknown
AA seq 751 aa
MMQAQITDKSSLAYQRMSWEALKKSINGLINKVNVSNIANIITELLQENIVRGRGLLARS
ILQAQSASPIFTHVYAAVVAIINSKFPNIGELILKRLILNFRKGYRRNDKQQCLTASKFV
AHLMNQNVAHEVLCLEMLTLLLERPTDDSIEVAIGFLKDCGLKLTEVSPRGINAIFDRLR
HVLHESETDKRVQYMIEVMFAVRKDGFKDHPVIQEGLDLVEEEDQFTHMLPLEDEYNPDD
ILNVFKMDPEFVENEEKYKTLKKEILDEGDSDSEADEDAGSSEEEDEDEEERGEEEEDED
GQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMDFPDSQTKELCNMILDCCA
QQRTYEKFFGLLAGRFCMLKKEYMESFEAIFKEQYDTIHRLETNKLRNVAKMFAHLLYTD
SLPWSVLECISLSEETTTSSSRIFVKIFFQELSEYMGLPNLNARLKDETLLPFFEGLLPR
DNPRNTRFAINFFTSIGLGGLTDELREHLKNAPKIIMTQKQDVESSDSSSESGTSDSEDD
SSSSETSGSSSGSESTSDSSDSSDSDPSKKKNKKKSQKKKNADKDTQRKQGNKKKKLEKE
KEWRWPERENGAARNSERNADKSSSRKDEAFYERDYSSDRNKSRSGKERDREKHLPLDSK
TSHSKKRKEGRPSFSDEERDEERDEERDRYHKRDSKLHREKKDRSKSRERPHHYPSPREF
EENSQYSNQFKEIRKDESRRRHRNASPSRHK
NT seq 2256 nt   +upstreamnt  +downstreamnt
atgatgcaggcacaaatcactgataaaagcagcttagcctatcaaagaatgagctgggaa
gccctgaagaaatccatcaatggtctgatcaacaaggtgaacgtttcaaacattgccaac
attatcactgaacttcttcaagaaaacattgtgagaggcaggggattactagcaagatca
attttgcaagcccagagcgcttcccccatcttcactcatgtatatgcagcagttgtagca
attatcaattccaaatttccaaatattggggaactgattctcaagagactcattttaaat
tttcgcaaaggatacagaaggaatgataagcaacagtgcctgacagcttccaagtttgtt
gcacatcttatgaatcagaatgtggctcacgaggttttgtgcttggaaatgcttacgttg
ctcctggaaagacccacagatgacagtattgaagtcgccattgggtttctgaaggactgt
ggcctgaagttaacggaagtgtcgcctagaggtattaacgccatctttgaccgccttcgc
cacgtccttcatgaatctgagactgacaagcgcgtccaatacatgattgaagtcatgttt
gcggtgcgcaaagatggattcaaagatcacccagtcattcaagaaggacttgaccttgtg
gaggaggaggatcagttcacccacatgttgcctttggaagacgaatacaatcccgatgac
attctcaatgtcttcaaaatggaccctgaatttgtggaaaacgaagagaagtacaaaact
ttgaaaaaagaaatcctggatgaaggtgacagtgactcagaagccgatgaggatgctggt
agtagtgaagaagaggatgaggatgaagaagaaagaggggaggaagaggaggatgaagat
ggacaaaaagttaccatccacgacaaaacggaaattaacttggtttccttccggcgaact
atttatctcgcaattcagtcaagtttagattttgaggaatgtgcccataaactattgaag
atggattttcctgacagtcaaacaaaagaactgtgcaacatgattcttgattgttgtgct
cagcaaagaacatacgaaaaattctttggtttactagctgggcgcttctgtatgttgaaa
aaagaatacatggagtcatttgaagcaattttcaaagagcagtatgataccatacatcgg
ttggaaacaaacaagttgaggaacgttgccaagatgtttgctcatcttttatacacagat
tcacttccatggagtgtccttgaatgcatttctctaagtgaagaaacgacaacatcatcc
agtaggatttttgttaaaatattcttccaggagcttagtgaatatatgggacttcctaat
cttaatgcgaggttgaaagatgaaaccctgctaccgttctttgaaggactattaccacga
gataatccaagaaatactagatttgcaatcaatttcttcacttcaattggccttggagga
ctgaccgacgaactacgggaacacctgaaaaatgcacccaaaataataatgacgcagaag
caagatgtggagtcatctgattcatcttcagaatcggggacatctgattcggaggatgat
tccagcagcagtgagacctcaggatcctctagtgggagtgaatccacttccgacagttcg
gacagcagtgactcagatcccagtaaaaaaaaaaataagaaaaagtctcaaaagaagaaa
aatgcggataaagacacccaaagaaaacaagggaataagaagaagaaacttgaaaaggaa
aaggaatggaggtggcccgagagggaaaatggtgctgcaagaaactcagagaggaatgct
gacaaaagctccagtagaaaagacgaagcattttatgagagagattattccagtgataga
aataaatcccggagtggaaaggagagggaccgagaaaaacatctccctctagacagtaaa
accagccattctaaaaaaagaaaagaaggaagaccttctttttctgatgaagagagggat
gaagagagggatgaagagagggacaggtaccataagagggacagcaagctccacagagag
aagaaggacagatctaagtccagagagaggcctcaccattatcccagccccagagagttt
gaggaaaacagccaatattcaaaccagtttaaagagataaggaaagacgaaagcaggaga
aggcacagaaatgcttccccatccaggcacaaatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (7)   

Download RDF
DBGET integrated database retrieval system