KEGG   Telopea speciosissima (New South Wales waratah): 122641586
Entry
122641586         CDS       T07910                                 
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
tss  Telopea speciosissima (New South Wales waratah)
Brite
KEGG Orthology (KO) [BR:tss00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tss03041]
    122641586
Spliceosome [BR:tss03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    122641586
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    122641586
SSDB
Motif
Pfam: MA3 HEAT_5MP1_2
Other DBs
NCBI-GeneID: 122641586
NCBI-ProteinID: XP_043690804
Position
10:5379239..5389430
AA seq 874 aa
MVNRDEEEVLDRVDLDKYRKKHRSSSHHHSRRGNESDSSESGEVREDRSKHRSERRDKYS
EQNEEGEIRESKDIRATGEDNRDSTDGGGDDSRRHGREERRESRPRDHHRDEKSSDREKD
GRLEDEGMRHNDSRRSKADADGGDRYENGRRQRQTESRRDRDRDRDRDRRFREDSGDDDG
RDTETDRNGERQSRRNLDTDGSGGHNQDREKNGRDDNRHDRRSRSERESDYNDTNHKKSR
EERRDDQMHGREKSTKVINEKKGDGKRLEDSKSQKPSTLQDGNPNGDTANLGRSGGVYIP
PFKLARMMKDVQDKNSIEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAENLVRGRG
LFCRSCMKSQMASPGFTDVFAALVAVVNTKFPEVGDLLLRRIVLQLKRAYKRNDKPQLLA
AVKFIAHIVNQQVAHEIIALELLTLLLENPTDDSVEVAVGFVTECGSLLQDLSPQGLHGI
FERFRGILHEGEIDKRVQFLIEGLFAVRKAKFQGYPAVRPELDLVEQEDQLTHELSLDDE
IDPRIALDIFKPDPNFLENEKRFEELKKSILGEESEEDEEGSDEGTDDEDDEDDEEEQEE
MMQINDETETNLVNLRRTIYLTIMSSVDFEEAGHKLLKIKLEPGQEMELCIMLLECCSQE
RTYLRYYGLLGQRFCMINKIHQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDAL
PWHVLSYIRLTEEDTTSSSRIFIKILFQELSEHLGIRLLNERLTDPSMQESFESIFPKDN
PKNTRFSINFFTSIGLGGITENLREYLKNMPRLIMQQQKAVSASESESDSGKSESSESND
SSSESQSESVSESSSSDDSESERDKRRHKRRRRD
NT seq 2625 nt   +upstreamnt  +downstreamnt
atggttaatcgagatgaagaggaagtattggatagggtggatctcgataagtataggaag
aaacacaggtcgagttctcatcatcatagtcgccgtgggaatgaaagtgattcctcagaa
tccggagaagttagggaggaccgatcgaagcacagaagcgaaaggcgtgataagtatagc
gaacagaatgaagagggtgaaattagggagagtaaagatattagggctacaggcgaagat
aatagggattcgacggatgggggtggagatgatagtcgacgccatggacgtgaggagcgg
agagaatctcgcccccgagatcatcatagagatgaaaaatcatctgatagagaaaaggat
gggagattggaggatgagggtatgaggcataatgatagtagaaggtccaaagcagatgct
gatgggggtgaccgatatgagaatggccgtagacagcgacaaactgagagtcgcagggac
agagacagggacagggacagggacaggcggttccgtgaggattcaggcgatgatgatggg
agagacacagaaactgacaggaacggagaaaggcaatcacgtaggaatttagacactgat
ggtagtggagggcataatcaagacagagaaaaaaatggaagagatgataataggcatgac
cggaggtctagaagtgagcgggaaagcgattacaatgatacaaatcataagaagagtcga
gaggagcgacgagatgatcaaatgcatggaagagagaagagcacaaaggtaatcaatgag
aagaaaggagatggtaagagactggaagattcaaaatctcagaagccatcgacgttacaa
gatgggaacccaaatggtgatacagcaaacttggggaggagtggaggagtttacattcct
ccatttaagttggctcggatgatgaaggatgtgcaagataaaaatagcattgaataccag
cggttgacgtgggatgctcttcgtaagagtataaatggacttgtaaacaaggttaatgcg
actaacattaagaatattatcccagaattatttgctgagaatcttgtacggggtagaggg
ctcttttgccggtcatgtatgaagtcacagatggcatccccaggttttacagatgttttt
gcagcattggttgctgttgtcaacaccaagtttcctgaagtgggtgatcttctattaaga
aggattgttttgcagctcaaacgggcatataagaggaatgacaagcctcaattgctggct
gcagttaaatttatagctcatattgtgaatcaacaagtggcacatgagattattgctttg
gagttgctcactctactgctggaaaatcctactgatgatagtgttgaggtggctgttggg
tttgtcacagaatgcggttcattgcttcaagacctttcaccacaaggcctccacggtatc
tttgagcggtttcgtggaatacttcatgaaggagaaattgacaagagggtccagttctta
attgaaggcctctttgcagtaagaaaagcaaaatttcagggttacccagctgtccgtcca
gaactggaccttgtggagcaagaagatcaattaactcatgagttatcccttgatgatgag
atcgatccacggattgctctagatatttttaagccggatccaaattttctggagaatgag
aagcgttttgaggagttgaagaaaagtatacttggggaggagtcggaggaggatgaagaa
ggctcagatgaaggcacagatgatgaggatgatgaggatgatgaagaagagcaagaagaa
atgatgcagataaatgatgaaacagaaacaaatcttgtaaatctacggaggacaatttat
ctgacaatcatgtccagtgttgatttcgaggaggctggtcataagttattaaagatcaaa
ctagagccagggcaagagatggagttgtgtatcatgctgttggaatgctgcagtcaagag
agaacatatcttcgatattatggtctcttaggacagcggttttgcatgatcaacaaaatt
caccaggaaaattttgagaaatgctttgtccaacaatattcaatgattcacaggcttgaa
accaataaattgcgcaatgtcgccaagttttttgctcatctactcggaacagatgctcta
ccttggcatgttttatcctatatacgtctgactgaagaggacacgacatcatcatcgcgt
atttttattaaaattctcttccaggaattgtctgaacaccttggaatccggttgctgaat
gaacgccttacagacccttccatgcaagaatctttcgagtctattttcccaaaagataat
cccaagaacacaaggttttcgattaacttctttacttccattggactgggtggtataaca
gaaaatctgcgggagtacttgaagaacatgcctagattaattatgcaacaacagaaggca
gtctcagcgtcagaatcagaatcagattctggtaaatcagagtcgtctgagtctaacgac
tcaagttctgaatctcaatctgaatctgtatctgagtcatcgagtagtgatgattctgaa
agtgaaagggataagagacgccacaaacgtcgcaggagagattaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (6)   

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