KEGG   Telopea speciosissima (New South Wales waratah): 122652741
Entry
122652741         CDS       T07910                                 
Name
(RefSeq) DNA repair protein recA homolog 1, chloroplastic isoform X1
  KO
K03553  recombination protein RecA
Organism
tss  Telopea speciosissima (New South Wales waratah)
Pathway
tss03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tss00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    122652741
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tss03400]
    122652741
DNA repair and recombination proteins [BR:tss03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     122652741
    RecFOR pathway proteins
     122652741
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    122652741
SSDB
Motif
Pfam: RecA_N RecA_C Rad51 ATPase AAA_25 MT3502_N ATPase_2 DUF7125 AAA_24 ABC_tran BMC
Other DBs
NCBI-GeneID: 122652741
NCBI-ProteinID: XP_043702502
Position
2:78727197..78735531
AA seq 417 aa
MGSKSISPLKTNFISSKFPSTFLPSSLQLPAFVRLSPVFSAKHTSIRCEFEAKGNGALSD
DTDPRFIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPR
GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQ
PDSGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKM
SGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASLRLEIRSTGKIKSVKGDE
DVGLRVRVRVQKSKVSRPYKQAEFDIIFGEGVSKMGCILDCAEMMDIVIKKGSWYGYGEH
RLGQGRDKALQYLRENPDLCNEIQKVLWSIITERTGQVGPAYIRHLPFQEEQIPEDV
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgggttcgaaatcgatatcccctctaaaaacaaactttatatcttcaaaatttccttca
actttcctcccatcgtctctgcaattgccagcttttgtccggttatcgccggtattctct
gcgaaacacacaagtattcgttgtgagttcgaagcaaaaggcaacggcgccctatccgat
gacaccgacccacgttttatcgaccgccaaaaagcattggaggcagcaatgaatgacatt
aacaactcttttggaaaaggaagtgttacaagattaggcagtgctggtggagctcttgtt
gaaacttttccgagtggttgtttgaccttggactttgcactgggtgggggacttcctaga
ggtagaattgtcgagatattcggtccagaaagtagtggaaagaccaccctggcactccat
gcgattgcagaagtgcagaaacttggaggcaatgccatgcttgttgatgcagagcatgcc
tttgatccagcatattcaagggctttgggagttgatatcgaaaatctgattgtttgccaa
cctgatagtggggaaatggcattggaaactgcggatcgtatgtgcagatctggtgccgta
gatctcatttgtgttgactctgtttctgctctcactccacgagctgaaatcgaaggtgag
attgggatgcagcaaatgggactacaggcacgtcttatgagtcaagctttgcgcaaaatg
tctggcaatgcttcaaaagctggatgcactcttattttcttgaatcaaataagatacaag
attggtgtcttttatgggaatcctgaagtcaccagtggaggaattgccttgaagttcttt
gcatcactacgtcttgaaatacgttctacaggaaagattaaatctgttaaaggagatgaa
gatgttggactcagggttcgtgtaagagttcaaaagagcaaggtgtccagaccctacaag
caagctgagtttgatattattttcggagagggagtgagtaaaatgggctgcattctagat
tgtgctgaaatgatggacatagtgataaagaagggttcttggtatggctatggggaacat
aggttgggtcagggcagggacaaagctctacagtacttgagggaaaatcctgacctttgc
aatgaaatacagaaggtgctttggtcaataataacagagagaaccgggcaagtaggtcct
gcgtacatcaggcacttgccatttcaagaagaacagatacctgaagatgtatga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (11)   
   Pfam (11)   
All databases (17)   

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