KEGG T07347: 117884834

Trachemys scripta elegans (red-eared slider): 117884834

Entry

117884834         CDS       T07347

Symbol

CWC22

Name

(RefSeq) pre-mRNA-splicing factor CWC22 homolog

K13100

pre-mRNA-splicing factor CWC22

Organism

tst Trachemys scripta elegans (red-eared slider)

Brite

KEGG Orthology (KO) [BR:tst00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tst03041]
    117884834 (CWC22)
Spliceosome [BR:tst03041]
Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    117884834 (CWC22)
Complex C
   U4/U6.U5 tri-SnRNP related factors
    117884834 (CWC22)

SSDB

Motif

Pfam:

MA3

Other DBs

NCBI-GeneID:

117884834

NCBI-ProteinID:

XP_034641571

Position

11:complement(43293060..43343294)

AA seq 897 aa
MKSRVAQINHGSSYERKESHSSRRRSSSPEDRYAERERSWSPRDRSYSDHSKYDQEYSGK
GRDDKTVEARGWGRETPQEKGREKESDRRKQKKFPSPDRKSPEKSVPHELVGSDEPPSKK
RKEELDPILTRTGGAYIPPAKLRMMQEQITDKNSLAYQRMSWEALKKSINGLVNKVNVSN
IENIIHELLQENIVRGRGLLSRSILQAQSASPIFTHVYAAVVAIINSKFPNIGELILKRL
ILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSIEVAIGFL
KECGLKLTEVSPRGINAIFDRLRHVLHESKIDMRVQYMIEVMFAVRKDGFKDHPIIPEGL
DLVEEEDQFTHMLPLEDDYNPEDVLNVFKMDPDFMENEEKYKTLKKEILDEGDSDSETDQ
DAGSSEEDEEEDEEDEEGQKVTIHDQTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMDF
PDSQTKELCNMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFEAIFKEQYDTIHRLET
NKLRNVAKMFAHLLYTDSLPWSVLECIILSEETTTSSSRIFVKIFFQELSEYMGLPNLNA
RLKDETLQPFFEGLLPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNAPKMIMTQKQDV
ESSDSSSSSSESDSSDSNSDSSNSSSGSSSGSDSSSSSDSDAAKVKRKKMQKKNKALDKV
ARKKQGSKKKLLEKKTERRQQEDRYDIDRNSERNADRNLRDSNRRDDLSKYPYDRDDAAD
RNSYRSEKDRYHERNMDLENKHGNSKKKKAERTSSFSDNEKDKHCTKDSVHHNRRKERSK
SRERNRNNSSPREEEEQNRYRNGAEKCPEKYSRYSDQCRESRKNEDRRRENSPRRRK

NT seq 2694 nt +upstreamnt +downstreamnt
atgaagagtagagtggcacagataaatcatggctccagttatgaaagaaaagagagccac
agctctcgtcggaggagttcctctccagaagacaggtatgcagagcgtgagaggtcttgg
tcccctagagacagaagctactctgatcacagcaagtatgatcaagaatattcaggaaag
ggacgtgatgacaaaactgtggaagccagggggtgggggagagagactccccaagagaag
gggcgagagaaggaatctgatagaaggaaacaaaaaaaattcccttcacctgatagaaaa
agtccagaaaaatcagtacctcatgagctagtaggctctgatgaacccccttcaaagaag
agaaaagaagagctggatccaattctcacccgcacaggtggcgcatacattcctccagca
aagctcaggatgatgcaggaacaaattacggataaaaatagcttagcatatcaaaggatg
agttgggaagccctgaagaagtcaatcaacggtcttgtcaataaggtgaatgtttctaat
atagaaaatatcatccatgaacttcttcaagaaaatattgtcagaggaaggggactgctg
tctagatcaattttgcaagcacaaagtgcctctccaatctttacacacgtttatgcagca
gttgtagcaattatcaattcaaagtttccaaatattggagaactgattctcaagaggcta
attctaaattttcgcaaaggatatcgcagaaatgataagcaactgtgtctgacagcttca
aagtttgttgcacatctaatcaatcagaatgtggctcatgaggttttatgtttggagatg
ctcacgttgcttcttgaaagaccaacagatgacagtattgaagtagcaataggatttctg
aaggaatgtggactcaaattaactgaagtttctcctagaggtattaatgcaatctttgac
cgccttcgccacgttcttcacgaatctaaaattgacatgcgcgttcagtacatgatagaa
gttatgtttgctgtacgtaaggatggattcaaggatcacccaatcattccagagggacta
gacctagtagaagaagaggatcagtttactcatatgctacctttagaagatgattataac
ccagaagatgttcttaatgttttcaagatggatcctgacttcatggaaaatgaagagaag
tacaaaacccttaagaaggaaattctcgatgaaggcgatagtgactcagaaacagatcaa
gatgctggaagcagtgaagaggatgaagaagaggatgaagaggatgaagaaggacaaaag
gtgacgatccatgaccaaaccgaaattaatctggtctcctttcgtcgtacaatttatctt
gctattcagtcaagcttagactttgaagaatgtgctcacaaattgctgaagatggacttt
cctgacagtcaaactaaagaactctgcaacatgatccttgactgctgtgctcaacaaaga
acatatgagaaattctttggtttactggcagggcgtttctgcatgttaaaaaaagaatac
atggaatcctttgaagctattttcaaagaacaatatgatactatccaccgtttggaaaca
aacaaattgagaaatgtagccaagatgtttgctcatcttctgtacacagattcacttccc
tggagtgtccttgaatgtataatattgagtgaagaaactactacatcgtccagtagaatt
tttgttaaaatattcttccaggaacttagtgaatatatgggacttcctaatcttaatgca
agattaaaggatgaaacactgcaacctttttttgaaggattattgcctcgggacaatcca
agaaacactcgatttgccatcaattttttcacttccattggtcttggaggattaacggat
gaattacgggaacatctgaaaaatgcaccaaagatgatcatgacacagaaacaagatgtt
gagtcatcagatagctcatcatcttcctccgagtctgactcctcagattccaattctgac
agcagtaacagtagctcgggatcatctagtggcagtgactcctcttctagcagtgactca
gatgctgctaaagtaaaaaggaagaagatgcaaaagaaaaacaaagcactggataaagtt
gccaggaaaaaacaagggagtaaaaagaaactacttgaaaagaaaacagaaaggagacag
caggaagatagatatgatattgatagaaattcagaaagaaatgctgacagaaatttgaga
gactcaaataggagagatgatctatctaaatatccctatgacagagatgatgccgctgac
aggaacagttaccggagtgaaaaggacaggtatcatgaaagaaatatggatttagaaaat
aaacacggtaattccaaaaagaagaaagcagagagaacttcttctttttctgataatgaa
aaggacaaacactgcactaaagacagtgtacatcacaataggagaaaagagaggtcaaaa
tctagagaaagaaaccgtaataattcaagtcccagagaggaagaggagcagaatcgatat
cggaatggtgcagagaaatgcccagagaagtatagccgatattctgaccaatgtagagaa
tccaggaaaaatgaggacagacgaagggagaattctccacgtaggcgaaaataa

All links

Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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