KEGG   Thiomicrolovo subterrani: WCX49_02340
Entry
WCX49_02340       CDS       T11234                                 
Name
(GenBank) RNA degradosome polyphosphate kinase
  KO
K00937  polyphosphate kinase [EC:2.7.4.1]
Organism
tsub  Thiomicrolovo subterrani
Pathway
tsub00190  Oxidative phosphorylation
tsub03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tsub00001]
 09100 Metabolism
  09102 Energy metabolism
   00190 Oxidative phosphorylation
    WCX49_02340
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    WCX49_02340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tsub03019]
    WCX49_02340
Enzymes [BR:tsub01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.4  Phosphotransferases with a phosphate group as acceptor
    2.7.4.1  ATP-polyphosphate phosphotransferase
     WCX49_02340
Messenger RNA biogenesis [BR:tsub03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     WCX49_02340
SSDB
Motif
Pfam: PP_kinase_C_1 PP_kinase_C PP_kinase PP_kinase_N PLDc_2
Other DBs
NCBI-ProteinID: XAU03294
Position
complement(459716..461809)
AA seq 697 aa
MTNLKDPKFYFNRELSWLQFNTRVLQQAQDKKQPLLERLKFLAIYGTNLDEFYMIRVAGL
KKLFTSGIILSGPDRLTPLQQLREIRKYLHRELQVVEHTFIEIMSGLKDEGIFLKRYSEL
NNQEKGEVNRYFHEHIYPVIVPIAVDGTHPFPHLNNLSFGLIVKLQDNDDANVQRYGLVR
IPRVLPRFVQIGTGIYVPIGSIVAQHIDELFPGYTLLQYTPFRVTRNADITIEEEEADDF
MEMLEEGLKLRKKGELVRLEIGVDADDELIDFFNRHTNVYKDDLYRFKIVLNLASLWQIV
GNKDFAHLVAAPYKPRNLPPLDSEDSIYSVLDKQDVLLYHPYESFEPIVKFIQAAAKDPD
VVSIRMTLYRSGTNSPIVNALMQAAESGKQVTTMVELKARFDEENNLIWAKALESAGAHV
IYGIPGFKVHAKAALVTRKVGDKLKQYAHLGTGNYNPGTAKIYTDVSYMTSNEAITNDMT
RFFHFLTGFSKKGKLNKLYMSPTQTKPKILSLIQNETRMGTEGRIIVKVNSLVDEDVIRA
LYKASQAGVKVDLIVRGICCLVPGIEGVSENIRVTSLIGKYLEHARVFYFKHGHPQMYIS
SADWMPRNLVRRIELMTGIEDEESKEKLLQLLTLQLTDNVLSHELQSDGSYHRVESGENP
VNSQLLLEQHTTKLYKSSKKRDTTYINKLASRLFKES
NT seq 2094 nt   +upstreamnt  +downstreamnt
atgaccaatctgaaagacccaaaattctatttcaaccgtgaactctcctggctccagttc
aacacccgtgtactgcagcaagcccaggacaaaaaacagccgctgctcgagcgcctgaag
ttccttgccatctacggcaccaacctcgacgaattctacatgatccgcgttgcggggctc
aagaagctcttcacctccgggatcatcctctcgggccccgaccgtctcaccccgctgcag
cagctgcgcgaaatccgcaagtacctccaccgggagctgcaggtcgtcgaacataccttt
atcgagatcatgtccggcctgaaagacgagggaatcttcctcaaacgctattcggagctg
aacaaccaggagaagggggaggtcaaccgctacttccatgaacacatctatcctgtaatc
gttccgatcgccgtcgacggtacccacccctttccgcacctgaacaacctcagcttcggc
ctcatcgtcaaactccaggacaacgacgatgcgaacgtccagcgctatggcctggtgcgc
atcccgcgggtcctgccccgcttcgtgcagatcggcaccggcatctacgtgcccatcggc
agcatcgtcgcacagcacatcgatgagctcttcccgggctataccctgctgcagtacacc
cctttccgcgtcacgcgcaacgccgacatcaccatcgaagaggaggaggccgacgacttc
atggagatgctcgaagagggactcaaactccgcaaaaaaggggagcttgtccgtctcgag
atcggggtcgacgccgatgatgaactgattgacttcttcaaccgccataccaacgtctat
aaagacgacctctaccgcttcaagatcgtgctgaacctcgccagcctttggcagatcgtc
ggcaacaaggattttgcgcacctcgtcgcggcaccgtacaaaccgcggaacctccccccg
ctggattcagaggacagcatctactccgtcctcgacaaacaggacgtcctgctctatcac
ccctatgagagtttcgagcccatcgtcaagttcatccaggcggcggccaaggatcccgac
gtcgtctccatccggatgacgctctaccgcagcgggacgaactcccccatcgtcaacgcc
ctgatgcaggcggccgaatcgggcaagcaggtcacgaccatggtcgaactcaaggcgcgt
ttcgacgaggagaacaatctcatctgggccaaggcgctggagagcgcgggcgcgcacgtc
atctacggcatccccggcttcaaggtccacgccaaggccgccctcgtcacccgcaaggtc
ggcgacaagctcaaacagtacgcccacctgggcacggggaactacaaccccggtacggcg
aagatctatacggacgtcagctacatgacctccaacgaggcgatcaccaacgacatgacc
cgcttcttccacttcctgacgggcttcagcaagaaagggaaactcaacaagctctacatg
tccccgacacagacgaagccgaagatcctctcgctgatccagaacgagacccgcatgggg
acggaggggcgcatcatcgtcaaagtcaactccctcgtcgacgaggacgtcatccgtgcc
ctctacaaagcgtcgcaggccggggtcaaggtcgacctgatcgtccgcgggatctgctgc
ctcgtcccgggcattgaaggggtgagcgaaaatatccgggtcacctccctgatcggaaag
tacctcgaacatgcccgtgtcttctactttaaacacggccatccgcagatgtacatctcg
agtgccgactggatgccgcggaacctcgtgcgccgtatcgaactgatgacgggcatcgag
gacgaagagtccaaagagaagctcctgcagctgcttaccctccagctcacggacaacgtc
ctttcccatgaactgcagagcgacggaagctaccaccgggtcgagtccggtgaaaacccg
gtcaactcccagctcctgctcgaacagcatacgaccaaactctacaagtcgtcgaaaaaa
cgcgacacgacctacatcaacaaactggcctcccgcctcttcaaagagagctga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (6)   

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