KEGG   Thermococcus thioreducens: A3L14_05880
Entry
A3L14_05880       CDS       T05104                                 
Name
(GenBank) mRNA surveillance protein Pelota
  KO
K06965  protein pelota
Organism
ttd  Thermococcus thioreducens
Pathway
ttd03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ttd00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    A3L14_05880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ttd03019]
    A3L14_05880
Messenger RNA biogenesis [BR:ttd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     A3L14_05880
SSDB
Motif
Pfam: eRF1_1 eRF1_3 eRF1_2 baeRF_family10 DrmE_N Host_attach baeRF_family12
Other DBs
NCBI-ProteinID: ASJ12449
UniProt: A0A0Q2M5J3
Position
1079307..1080380
AA seq 357 aa
MQIIHQDVKEGKIKVKAETLDDLWHLYHIIDPGDTVYAKTLRKQSQRSDSLRAEKVEVIP
VFLGVKAEKINFHKFANQVRVTGPIVYASRDDVPLGKYHTIAIEEGTVVTIQKPRWKEHH
IERLKEAVEASKRARVMIVVIDDGEADMAIIREYGVEILKGIRYNLGGKRYSTNRESEEK
KFFHDVAKSMEEIISREGIERAIVAGPGFVKEDFHKFLRENYPELAKKVVIEDTSVTGRT
GIYEVIRRGTVDKVYHENRVAKEVQLVERVLENIAKNNGLAAYGLREVEEAVNYGAVETL
LVLDELLKGEHREKIEELMDAVRYSRGEVVVISSEHEGGDKLKALGGLAALLRFRVK
NT seq 1074 nt   +upstreamnt  +downstreamnt
atgcagataatccaccaggacgtcaaggagggcaagataaaggtcaaggccgagacgctc
gacgacctctggcacctctaccacatcatagacccgggcgataccgtttacgcgaaaacg
ctcaggaagcagagccagaggagcgattccctgagggccgagaaggttgaggtcatcccg
gtctttctcggcgttaaggcagagaagataaacttccacaagttcgccaaccaggttcgc
gtcaccgggccgatagtctacgccagcagggacgacgtccccctcggcaagtaccacacg
atagcgatagaggaaggcacggtcgttaccattcagaagccccgctggaaggagcaccac
atagagaggctgaaagaagcggttgaggcatcaaagagggcaagggtcatgatagtcgtc
atagacgacggcgaggcggacatggcgataatcagagaatacggcgtcgagatactcaag
gggatacgctacaacctcggggggaagaggtacagcaccaaccgcgagagcgaggagaag
aagttcttccacgacgttgccaagagcatggaggagataatcagccgtgaaggaatagag
agggccatagtagccggtccaggcttcgtcaaggaggacttccacaagttcctgcgcgag
aactacccggagctggccaagaaggtggtaatcgaggacacgagcgtgaccgggaggact
ggcatctacgaggtcataaggcgcggaacagtcgataaagtctaccacgagaaccgcgtt
gctaaagaggttcagctcgtcgagagggtgcttgagaatatagctaaaaacaacggcctg
gccgcttacggtctcagagaggtcgaggaggccgtgaactacggcgccgttgaaacgctc
ctggttctcgacgaactgctcaagggagagcacagggaaaagatagaggagctcatggac
gcggtgaggtattctaggggcgaggtcgttgttataagctcggagcacgagggaggcgac
aagctgaaagcgttgggcggcctggcggcactgctgaggttcagggtgaagtga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (10)   

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