KEGG   Tachysurus vachellii: 132843135
Entry
132843135         CDS       T09596                                 
Symbol
papola
Name
(RefSeq) poly(A) polymerase alpha isoform X1
  KO
K14376  poly(A) polymerase [EC:2.7.7.19]
Organism
tvc  Tachysurus vachellii
Pathway
tvc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tvc00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    132843135 (papola)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tvc03019]
    132843135 (papola)
Enzymes [BR:tvc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     132843135 (papola)
Messenger RNA biogenesis [BR:tvc03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     132843135 (papola)
SSDB
Motif
Pfam: PAP_NTPase PAP_central PAP_RNA-bind NTP_transf_2 MTPAP-like_central DUF6431
Other DBs
NCBI-GeneID: 132843135
NCBI-ProteinID: XP_060722236
Position
3:complement(21302035..21320562)
AA seq 798 aa
MPFPITNQVQPAQDSPKHYGITSPISMALPKESDLVHAQKLVQALKPFNVFEEELELQRR
ILVLGKLNTLVKEWIQDISRSKNIPPALIESIGGKIFTFGSYRLGVHTKGADIDALCVAP
RHVDRSDFFTSFYEKLKEQEDVKDLRAVEEAFVPVIKLCYDGIEIDILFARLALQTIPEN
LDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIENFRLTLRAIKLWAKRHNIYSNIL
GFLGGVSWAMLVARTCQLYPNAVASTLVYKFFLVFSKWEWPNPVLLKQPVECNLNLPVWD
PRVTPSDRYHLMPIITPAYPQQNSTYNVSASTRNVMVEEFKQGLAIMDEILQNKADWAKL
FESPNFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSF
PGPKESNKTPEWCTMWVIGIEFRKMEGSELLNVDLTYDIQSFTDTVYRQAISSKMFETDM
KITAMHVKRKQLHQLLPDLVIPKRRKHSTESLRAVNESGVDLSLDSDNSMSIPSPTRTSS
AARTPFSASPHRSTGTSASSDSQGKVNTSGGTHSAAVSLSEPHAQKRPASPHHEENSTKK
LRLQQHLDLNEESVDKDNSTSLPSPTGTSGTAFSASPHRSTGTSSDSQGKMDTSVDTHPT
AACPSETETSSPAHIKKRPGSPLHDEQAKKLRLEEDSTSESMDQAADFADLSQASDFSAL
DREVKMETEAAESDAEGQVPLSQKASSTDLSDVPLPPANPIQVVKNSIKLRLMNVSQGAV
YEDYIQLHPKVHQDYSVL
NT seq 2397 nt   +upstreamnt  +downstreamnt
atgccttttccaattacgaatcaggtgcaaccagctcaggactccccaaagcattatggg
attacttcgcccatcagcatggccttgccgaaagaatcggacctggtgcacgcgcagaaa
ctggtgcaggcgctgaagcctttcaacgtgtttgaagaggagttggagctgcaacggaga
atccttgttctgggaaaactaaacacactggtcaaggaatggatccaagacatcagtaga
tcaaagaatatacctccagcattgatagaaagcattggtggaaaaatatttacgtttggc
tcttataggttaggagtccatacaaaaggtgctgatatagatgctctctgtgtcgcacct
cgacacgtggacaggtctgacttctttacctctttttacgagaagttaaaagagcaagag
gacgtcaaggacttaagggctgtcgaagaggcatttgtcccagtgattaaactgtgctat
gatggtattgagattgatatcctgtttgctcggttagctctgcagaccattcctgagaac
ctggacctgcgggacgatagtttactgaagaatctggatatccgctgtatacggagtctg
aacggatgcagggtgactgatgagattctccacctggtgcccaacattgagaatttcaga
cttactcttagagccatcaaactgtgggctaaacgtcacaacatatattcaaatatcttg
ggtttcttgggcggtgtgtcgtgggcgatgctggtggcgagaacgtgtcagctttacccc
aacgctgtggcttcaaccctcgtgtataagttctttcttgtgttttctaagtgggagtgg
cctaatccagtccttttgaagcaaccagttgagtgcaacctcaacctgccagtgtgggat
ccaagggtgacaccgagtgaccggtaccacctcatgcccatcatcacaccagcttatcct
cagcaaaactccacatacaacgtgtctgcgtccacccgcaacgtcatggtggaagagttc
aaacagggtctggccattatggatgaaatattgcagaacaaagcagactgggccaaacta
tttgaatctcccaacttctttcagaaatacaagcattatattgtgttgctagcaagtgcg
cctactgagaagcagcacctcgaatgggttggcctcgtcgagtccaagatccgaatcttg
gtaggaagcctggagaaaaatgagttcatcactctggcacatgtgaacccacagtcgttt
ccaggacccaaggaaagcaataagacgccagaatggtgcacgatgtgggtcataggtatc
gagttcaggaaaatggaggggtccgagcttcttaacgtcgacttgacgtacgacatccag
tcgttcacagacactgtgtaccgtcaggccatcagcagcaagatgtttgagactgacatg
aaaataacggcgatgcacgtgaagaggaagcagcttcaccagctcctgccggaccttgtt
atccccaaaaggagaaagcattcgactgaaagcctgcgtgctgtgaatgagagtggtgtg
gacttgtctctggacagtgataacagcatgtccatcccctcgcccacccgcacctccagc
gctgccaggacacccttctctgccagtcctcaccgctccacagggactagtgccagctca
gattctcaggggaaggtgaacacctcaggaggcacacattctgctgcagtgtctctatca
gagcctcatgcacagaagagaccagcctcacctcaccatgaagagaactccacaaagaag
ctccgattgcagcagcatttagatttgaatgaggaaagtgtggacaaggataacagcacg
tccttgccttcacccactggcacctccgggacagccttctctgccagtcctcaccgctcc
acagggaccagctcagattctcaaggaaagatggacacgtcagtagacacacaccctact
gcagcatgtccgtcagagactgaaacctccagtcctgctcatataaagaagagaccgggc
tcaccgctccatgacgagcaagccaagaagctcagattagaggaggattctacctcagaa
tcaatggaccaggctgctgattttgctgatttatctcaggctagcgatttctctgcttta
gacagagaggtgaaaatggagacagaagcagcggagtcggatgcagaagggcaggtacca
ctatctcagaaagcgtccagcaccgatctttccgatgtccctcttcctccggcgaaccca
atccaagtggtgaaaaactccataaagctcagactgatgaatgtgagccaaggtgccgta
tatgaagattatatacaactgcatccaaaagttcatcaggattatagcgtcttataa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

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