KEGG   Thalassomonas viridans: SG34_021745
Entry
SG34_021745       CDS       T08831                                 
Name
(GenBank) RNA polymerase sigma factor FliA
  KO
K02405  RNA polymerase sigma factor FliA
Organism
tvd  Thalassomonas viridans
Pathway
tvd02020  Two-component system
tvd02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:tvd00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SG34_021745
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    SG34_021745
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tvd03021]
    SG34_021745
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:tvd02035]
    SG34_021745
Transcription machinery [BR:tvd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SG34_021745
Bacterial motility proteins [BR:tvd02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    SG34_021745
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 HTH_23 GerE UPF0122 CT_C_D
Other DBs
NCBI-ProteinID: WDE08340
UniProt: A0AAF0CD61
Position
complement(4946564..4947259)
AA seq 231 aa
MHTDKSALLERHSVLVKRIAYHLLARLPSSVLVDDLIQSGMIGLFEAANNFDGSKGASFE
TFAGIRIRGAMLDEIRRGDWTPRSVHKNSRLISDAIRVLEAELGRDVTDIEVAEKLDISL
NEYHHILNEVSSGKIIGIADLGASEDTINFDEDSHVDDPYQNIEQVAFKKGLAECISTLP
EREALVLSLYYDEELNLREIGQVLDISESRVSQIHSQAMHRLKARMQSWKS
NT seq 696 nt   +upstreamnt  +downstreamnt
atgcataccgacaaatccgcacttttggagcggcatagcgtattagtcaaacgtattgcc
taccacttgctggccaggttaccttcaagtgtacttgttgatgatctgatccagtccggc
atgataggcctttttgaagccgccaataactttgacggcagcaagggggcaagttttgaa
acttttgccggtatccgcatccgcggcgccatgcttgacgagattcgccgcggcgactgg
accccgagatccgtccataaaaacagccgtttgatcagtgatgctatccgggtgctggaa
gccgaattgggccgggatgtgaccgacatagaagttgctgaaaaacttgatatttcattg
aatgaataccatcatatactaaacgaagtcagtagtggcaaaataataggtattgcagat
ctgggagccagtgaagataccattaattttgatgaagacagccacgttgatgatccttat
caaaacatcgaacaggttgcctttaaaaagggcttggctgagtgtatttctactttacct
gagcgggaagctttagtactgtccctgtattatgatgaagaattgaatttgcgtgaaatt
ggccaggtgctggatatcagtgaatccagggtcagccaaattcactctcaggcgatgcat
aggttaaaagcacgtatgcaatcctggaaaagttaa

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (10)   

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