KEGG   Trinickia violacea: FAZ95_21320
Entry
FAZ95_21320       CDS       T09503                                 
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
  KO
K03500  16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
Organism
tvl  Trinickia violacea
Brite
KEGG Orthology (KO) [BR:tvl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tvl03009]
    FAZ95_21320 (rsmB)
Enzymes [BR:tvl01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.176  16S rRNA (cytosine967-C5)-methyltransferase
     FAZ95_21320 (rsmB)
Ribosome biogenesis [BR:tvl03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    FAZ95_21320 (rsmB)
SSDB
Motif
Pfam: Methyltr_RsmB-F RsmF-B_ferredox NusB
Other DBs
NCBI-ProteinID: QCP51473
UniProt: A0A4P8IVK5
Position
1:complement(4645582..4647030)
AA seq 482 aa
MTQKSAARRQPKQPAAPKHAARQARLSALHLVPESLGFALDGAAQAVGAVRYGTALPAAL
AAVNASSNAAHAAMSRGAVQDIAYRTLRRLATADWLVAKLVRKAPAAHVGNVLSCALTLL
SDDADTAAYAPFTVVDQAVEAIGARREFAFAKGLVNAVLRNFLRERDALLNESRVDRVAR
WNYPAWWIDAVEHAWPDRWQDILESGNRQGPLTLRVNARRSTVAAYLETLRAHQIDAREA
GVHAVRLATPTPVERIPGFADGVVSVQDAGAQLAAQWLGARDGMRVLDACAAPGGKTGHV
LELADVDLVALESDASRAARIGENLARLGLKADVRIGDAGDPSQWHDGAAFDRILADVPC
SASGIVRRHPDIRWLRRESDIAALAAEQRRILAALWPLVKPGGELLYVTCSIFPEEGELQ
AQWFGGAHEDAVRLDAPGQLVPVLAREAATAAAERPSATPLGQRTGSDTDHDGFFYARFQ
KR
NT seq 1449 nt   +upstreamnt  +downstreamnt
atgactcaaaaatccgccgcgcgtcgccagccgaaacagcctgcagcaccgaaacacgca
gcgcgacaggcgcgcctatcggcactgcatctcgtgcccgaatcgcttggctttgcgctc
gatggcgcggcccaggccgtcggcgccgtccgttatggcaccgcgctgccggcggcgctt
gctgccgtgaacgcatcgtcgaacgcggctcacgccgcgatgtcgcgcggcgccgtgcag
gatatcgcctatcgaacgctgcgccgcctcgcaaccgccgattggctcgttgcgaagctg
gtccgcaaggcccccgccgcacatgtcggcaacgtgctcagttgtgcgctcacgctgctc
tccgacgatgccgatacggccgcttacgcaccgttcaccgtcgtcgatcaggccgtcgag
gcaatcggcgcgagacgcgaattcgccttcgcgaaagggctcgtcaacgctgtgctgcgc
aacttcctgcgcgagcgcgacgcgctgctgaacgagtcccgcgtggaccgcgtcgcgcgc
tggaactatccggcttggtggatcgacgcggtcgaacacgcgtggcccgatcgctggcag
gacattctcgaatcaggcaatcgacaagggccgttgacactgcgcgtcaacgcgcgccgc
tcgacggtcgcggcttacttggaaacgttgcgcgcgcatcaaatcgacgcgcgggaggcc
ggcgttcacgcggtgcggctcgcgacgcccacgccggtcgagcgcattcccggctttgcc
gacggcgtcgtgtccgttcaggacgccggcgcgcaactcgccgcgcaatggctcggcgcg
cgcgacggcatgcgtgtgctcgatgcctgtgcagcgcccggcggcaagaccggacacgtg
ctcgagctggccgacgtcgacctcgtcgcgctcgaaagcgacgcctcgcgggcggcgcgc
atcggcgagaatctcgcgcgcctcggactcaaagccgacgtgcgcatcggcgatgccggc
gatccctcgcaatggcacgacggcgccgcgttcgaccgcatcctcgccgacgtgccgtgc
tcggcgtcgggcatcgtccggcgccaccccgacatccgctggctgcggcgcgagtcggat
atcgccgccctcgccgccgagcaacgccgcatcctcgccgccctgtggccgctcgtgaaa
cctggcggcgagttgctctacgttacctgctcgatctttccggaagagggcgagttgcag
gcgcagtggtttggaggcgcgcatgaagatgcggtacgattggacgcaccggggcaactg
gtgccggttctcgcccgcgaagcagccacagccgcggccgaacgcccgagcgcaacgccg
ctcgggcagcgcaccggttcagacacagaccacgacggattcttctacgcgcgctttcag
aaacggtga

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (5)   

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