KEGG   Thermostichus vulcanus: NIES2134_104570
Entry
NIES2134_104570   CDS       T05980                                 
Symbol
recJ
Name
(GenBank) single-strand-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tvn  Thermostichus vulcanus
Pathway
tvn03410  Base excision repair
tvn03430  Mismatch repair
tvn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tvn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    NIES2134_104570 (recJ)
   03430 Mismatch repair
    NIES2134_104570 (recJ)
   03440 Homologous recombination
    NIES2134_104570 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tvn03400]
    NIES2134_104570 (recJ)
DNA repair and recombination proteins [BR:tvn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     NIES2134_104570 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     NIES2134_104570 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      NIES2134_104570 (recJ)
SSDB
Motif
Pfam: DHH DHHA1 RecJ_OB
Other DBs
NCBI-ProteinID: BAY51946
Position
462175..464433
AA seq 752 aa
MQRPWQIYSADPAPRDFIEAVKQLHPEAGAITAQLLWQRGYRDSLRQVPPFLDWRYYESA
SPLEFPEMSAALGRLQQALDQQEKVAIWGDFDTDGVTATAVLWEGLKPLLGTQLVDFYIP
NRHHDSHGLSPHGLQQLQQKGVALIITCDTGSTNGPEIVLARQLGMDVIVTDHHTLDPTP
LGAVALINPRQLPWDHPLRHLSGVGVAYKFLEAVYDRWPEKTQGYPLENLLDLVAIGLIA
DWVELRGECRYLAQRGLDQLGKRQTLRPGIAALLGHVSKHRAWQREISFTVAPRLNAVSR
VEGDVRPLITLLTTQDRHEARQLAERIATLNTERQRRQKEVTRMAHAKAAQLDLSASRVI
LLTDDNWPLSLLGLVANDIVKTYGRPALLLQTNPETGMAVGSARSDGSVDLYEAFHSQRH
LLEGLGGHPYAVGFRLKMAHIPLLAAALNQFLAQQEGTASATPKPLIIDLEVTLGQLNGQ
LLKELEVLAPFDSTHHPYPRLLVRNVELTQLRDNKLRDNNSHGGRRYVSMVLHDRQHQHT
FPAKWWDHQIGDCPQGACDLVIELEEWQGSLSAVIKELRPSETNVIQEASFQPLMDYRDR
PPAASVKGLRVETCPTSRQSWRQWIQRAKREQQPLILAYALPPEQDALKVWREFLTLCQQ
ATQQGKPLEREGLQKRLGIEATTLNYALQVLETLGVKVLSTPEEFWCQWPPQLSSSPPTG
LALERFTAAIAEENFRRRYFAAAPLQALQETY
NT seq 2259 nt   +upstreamnt  +downstreamnt
atgcagcgcccttggcaaatctattctgctgatcccgccccccgagacttcatcgaggca
gttaagcagctccatcccgaggcaggcgccattacggctcagttactttggcagcgcggc
taccgtgattcccttcggcaagtgcccccttttctagattggcgctactacgagtcagcc
tcccccctagagtttccagagatgtccgctgccctagggcgtttgcaacaggcactcgat
caacaggaaaaagttgcgatttggggagactttgacaccgatggagttacagcgactgcc
gtcctttgggaaggactaaaaccccttttgggaacgcaactggtggatttttatattccc
aatcgccaccacgactcccatggtctttcgccccatggcctccagcagcttcagcaaaaa
ggcgtcgctctaattattacctgcgatacgggctctaccaatggccctgaaattgtcctt
gcccgtcagttggggatggatgtgattgttactgatcaccacacccttgatcccactccc
ttgggggccgtggcgctgatcaatccgcggcagttgccctgggatcatcccctacgtcat
ttatcgggagttggcgtcgcctacaaattcttggaagccgtctatgacagatggccagag
aaaacccaggggtatcccctcgagaatctccttgatctggtggccattggcctaattgct
gattgggttgaattgcgaggagagtgccgctatcttgcccagcgaggcttagaccaactg
ggaaagcgtcagaccctccgacccggaattgctgcccttttggggcacgtgtccaagcat
agggcttggcagcgggagattagttttaccgtcgcccctcgcctcaatgccgtgagtcgt
gtagagggggatgtgcgacccctgattacgctcttgaccacccaagatcggcacgaagcg
cggcagttggcagagcgtatagcaaccctgaatacagaacggcagcgacgccaaaaggag
gtgacgaggatggctcatgccaaagcggctcagttagacctctcagcatcacgggtgatt
ctcctcaccgatgacaattggccattgagtcttttggggctggtggcgaacgatattgtc
aaaacctatggtcgccccgcccttttgctgcagacgaatccagaaacgggaatggcagta
ggttcagcgcgctctgatggctctgtggatctctatgaggcattccatagccaacggcat
ttacttgaggggttgggtgggcatccctatgcagtaggctttaggctgaagatggcgcac
atcccccttttggcagcagccctcaaccaattcttggcacagcaagagggcaccgccagc
gctacaccgaaaccgttaatcattgacctggaagtcaccttgggtcaactcaatgggcaa
ttgctcaaggaactagaagtccttgccccctttgatagcacccaccatccctatccgcga
ttgctggtgcgcaatgtggaactcacccaactgagggataataaactgagggataataac
agtcacggcgggagaaggtatgtctcaatggtactccacgatcgccagcaccagcacacc
tttcctgccaagtggtgggatcatcaaatcggcgattgcccccagggagcctgtgatctc
gtgattgaactagaggagtggcaaggctccctatcagccgtcattaaagagctacgaccc
agtgaaaccaatgtgatccaagaagcgtcttttcagccccttatggattatcgcgatcgc
ccccctgcggcaagcgtcaagggtttgcgcgtagaaacctgccccacctcccggcaaagc
tggcgccaatggattcagcgagcaaagagggaacagcaacccttgattttggcctacgct
cttcccccagagcaggatgccctaaaggtctggcgggaatttctaacgctgtgccaacaa
gccacgcaacagggaaaacccttagaacgagaggggctgcagaaacgcctgggcattgaa
gccaccacactcaactatgccctccaggtgcttgagaccctgggggttaaggttctctct
accccagaggaattttggtgtcaatggccaccacagctcagctcttctccccctacggga
ctggccttagagaggttcacagcagcgatcgccgaggagaatttccgtcgtcgctatttt
gctgctgcccccctccaggcccttcaggaaacctattaa

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (3)   
   Pfam (3)   
All databases (4)   

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