KEGG   Trichosurus vulpecula (common brushtail): 118831335
Entry
118831335         CDS       T10126                                 
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
  KO
K13175  THO complex subunit 6
Organism
tvp  Trichosurus vulpecula (common brushtail)
Pathway
tvp03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:tvp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    118831335 (THOC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tvp03019]
    118831335 (THOC6)
   03041 Spliceosome [BR:tvp03041]
    118831335 (THOC6)
Messenger RNA biogenesis [BR:tvp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     118831335 (THOC6)
Spliceosome [BR:tvp03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    118831335 (THOC6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 WD40_Prp19 WDR55 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML NBCH_WD40 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_IFT122_1st WDR54 Beta-prop_IP5PC_F Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_NUP159_NUP214 Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_DCAF12 WD40_like WD40_RFWD3
Other DBs
NCBI-GeneID: 118831335
NCBI-ProteinID: XP_036594533
Position
9:1145871..1149726
AA seq 426 aa
MAGSGPASKPRKPAKQKWQPEGRRLDGRKTFLTRRDTSCGMEVQQALERLHMTIFSQSVS
PCGKFLAAGNNYGQIAVFSLSAALSSEAKEESKKPVVTFVAHDGPVYSLVSTDRHLLSAG
DGEVKAWLWGEILKKVRAGALCGERKADVPQRESLDLSCALSLPPRAVRRYGAGIPHTGE
RACWGGALLVLFPPLRLTPFALLNRSSLEVPEINALLLNPKENSLLLAGGDCQLHTMDLE
TGTFTRALRGHSDYIHCLALRERSPEVLSGSEDGTVRLWDLRTGEEVQTIEVYRHEECAR
PQNGKWIGCLATDSDWMVCGGGPALTLWHLRSATPTTVFPLRAPQKHVTFYQDLILSAGQ
GPCVNQWQLSGELKAQVPGSSPSLLSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLGYRA
FSLSFS
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggcggggagcgggccggcgtccaagccgaggaaacccgccaaacaaaaatggcagccg
gagggaaggcgattagacggcaggaaaaccttcctgacccggagagatacgagctgtggt
atggaggtccagcaggccttggagcggctgcacatgaccatattctcccagagcgtttct
ccctgcggcaagttcttagcggcagggaacaactacgggcagattgccgtcttcagcttg
tcggctgctttgagctcagaggccaaagaggagagtaagaagccggtggtgacctttgta
gcccacgatggccctgtgtacagcctggtgtccacagaccgacatctgctcagtgcgggc
gacggtgaggtgaaagcctggctgtggggggagatcctcaagaaggtaagggcgggggct
ctgtgcggggaacggaaggccgacgtgccgcagagggagtccctggatctgtcttgtgct
ctctctctccccccaagggctgtaaggaggtatggagccggcatcccccatacaggtgag
cgggcttgttgggggggggccctgctagtgctgtttcctcctctcaggctgactcccttt
gcccttctgaacaggagcagcctggaagttcctgaaatcaatgctttgctgcttaacccg
aaggagaattccctcctcttggcagggggcgactgccagcttcataccatggatctggag
acagggacgttcacacgcgcacttcgaggtcacagtgattacattcattgtctagctctt
cgggaaaggagtcccgaagtgctgtctgggagtgaggatggcaccgttcgtctttgggat
cttcgtacgggagaggaggttcagaccatcgaagtttacaggcatgaggagtgtgctcga
ccccagaatgggaagtggattggatgtttagcaactgactccgattggatggtatgtgga
ggagggcccgctcttactctttggcaccttcgatctgccacacccaccacagtatttcca
cttagggcgccacagaagcatgtaaccttctaccaggacctgatcctctcagcagggcaa
ggaccctgtgtgaaccagtggcagctgagtggggagctgaaggcccaggtacctggctcc
tctcccagcctgcttagtctcagcctcaaccagcagcctgctgcaccagagtgcaaggtc
ctgacagctgcaggaaatagctgtagggttgatgtcttcactaaccttggataccgagct
ttctccctgtctttctcctga

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (27)   
   Pfam (27)   
All databases (41)   

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