KEGG   Trichosurus vulpecula (common brushtail): 118856559
Entry
118856559         CDS       T10126                                 
Symbol
GTF2H4
Name
(RefSeq) general transcription factor IIH subunit 4
  KO
K03144  transcription initiation factor TFIIH subunit 4
Organism
tvp  Trichosurus vulpecula (common brushtail)
Pathway
tvp03022  Basal transcription factors
tvp03420  Nucleotide excision repair
tvp05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:tvp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    118856559 (GTF2H4)
  09124 Replication and repair
   03420 Nucleotide excision repair
    118856559 (GTF2H4)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    118856559 (GTF2H4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tvp03021]
    118856559 (GTF2H4)
   03400 DNA repair and recombination proteins [BR:tvp03400]
    118856559 (GTF2H4)
Transcription machinery [BR:tvp03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     118856559 (GTF2H4)
DNA repair and recombination proteins [BR:tvp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     118856559 (GTF2H4)
SSDB
Motif
Pfam: Tfb2 Tfb2_C Helicase_C_3
Other DBs
NCBI-GeneID: 118856559
NCBI-ProteinID: XP_036622824
Position
7:266579704..266589195
AA seq 464 aa
MMEGTPPRTGLNRGQLQCRNLQEFLRGLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMR
MLFLEQPLPQAAVALWVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPVFRQNL
RVALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVILHFMVGSPSAAVSQDLAQL
LSQAGLMKSSEPGEPPCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLF
QLSFSTLGKDYSVEGMSDSLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGVTGAG
GTAHQPGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIANG
ITAQQIIHFLKTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFSEGVLYNQFLSQVDF
ELLLSHARELGVLVFENTAKRLMVVTPAGHSDVKRFWKRQKHSS
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgatggaggggactccgcctcggaccgggctgaaccggggacagctacagtgccgtaac
ctgcaggagtttttgaggggtttgagtcctggagtactagaccgactttatggtcaccca
gccacctgcctggctgtctttagggagctcccatccttggctaagaactgggtgatgcgg
atgttgtttctggagcagccattgccccaagcagctgtagccctgtgggtgaagaaggaa
tttagcaaagcccaagaagaaagcacaggactgttgagtggtctccgtatctggcacacc
cagttgctccctggtggcctccaaggccttatcctcaaccctgtcttcagacagaatctt
cgtgttgctcttttgggaggggggaaggcttggtcagatgacacaagtcagcttggccca
gacaaacatgcccgggatgttccatcactggacaagtatgcagaggaaagatgggaggtg
atcctgcacttcatggttggctccccgagcgcagccgtcagccaggacctggcccagcta
ctcagccaggccgggctcatgaagagttctgagcctggagagccaccctgcatcacctct
gcgggcttccagttcttgctgctagacacacctgcccagctttggtattttatgctgcag
tatttgcagacagcccagagccgaggcatggacctggttgagatcctgtccttcctcttc
cagcttagcttctctactcttggaaaggattattctgtggagggcatgagtgattccctt
cttaactttttgcaacatctgcgagagtttgggctggtgttccaaaggaagagaaagtct
cgacggtactatccaacccgactggctatcaacttgtcatcaggtgttactggtgctgga
ggtactgctcatcagccaggcttcattgttgtggaaaccaactaccggctatatgcctac
actgagtcagaacttcagattgcactcattgccctgttctctgagatgctctatcgattc
cccaatatggtagtagcccaggttactcgggagagtgtgcagcaggccattgctaatggt
atcacagcccagcagatcatccacttcctgaagacgagagcacatccagtgatgctgaaa
cagacccctgtactgcctcccaccatcacagatcagatccgactctgggagttggagaga
gaccgccttcgattctctgagggcgttctgtacaaccagttcctgtcccaggtggacttt
gagctgctgctgtcgcacgcccgggagctgggtgtgctggtcttcgagaacacggccaag
cggctcatggtggtgaccccagcagggcacagtgacgtcaagcggttttggaagaggcag
aagcacagctcctga

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