KEGG   Trichosurus vulpecula (common brushtail): 118857179
Entry
118857179         CDS       T10126                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DM beta chain
  KO
K06752  MHC class II antigen
Organism
tvp  Trichosurus vulpecula (common brushtail)
Pathway
tvp04145  Phagosome
tvp04514  Cell adhesion molecules
tvp04612  Antigen processing and presentation
tvp04640  Hematopoietic cell lineage
tvp04658  Th1 and Th2 cell differentiation
tvp04659  Th17 cell differentiation
tvp04672  Intestinal immune network for IgA production
tvp04940  Type I diabetes mellitus
tvp05140  Leishmaniasis
tvp05145  Toxoplasmosis
tvp05150  Staphylococcus aureus infection
tvp05152  Tuberculosis
tvp05164  Influenza A
tvp05166  Human T-cell leukemia virus 1 infection
tvp05168  Herpes simplex virus 1 infection
tvp05169  Epstein-Barr virus infection
tvp05310  Asthma
tvp05320  Autoimmune thyroid disease
tvp05321  Inflammatory bowel disease
tvp05322  Systemic lupus erythematosus
tvp05323  Rheumatoid arthritis
tvp05330  Allograft rejection
tvp05332  Graft-versus-host disease
tvp05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:tvp00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    118857179
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    118857179
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    118857179
   04612 Antigen processing and presentation
    118857179
   04658 Th1 and Th2 cell differentiation
    118857179
   04659 Th17 cell differentiation
    118857179
   04672 Intestinal immune network for IgA production
    118857179
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    118857179
   05164 Influenza A
    118857179
   05168 Herpes simplex virus 1 infection
    118857179
   05169 Epstein-Barr virus infection
    118857179
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    118857179
   05152 Tuberculosis
    118857179
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    118857179
   05140 Leishmaniasis
    118857179
  09163 Immune disease
   05310 Asthma
    118857179
   05322 Systemic lupus erythematosus
    118857179
   05323 Rheumatoid arthritis
    118857179
   05320 Autoimmune thyroid disease
    118857179
   05321 Inflammatory bowel disease
    118857179
   05330 Allograft rejection
    118857179
   05332 Graft-versus-host disease
    118857179
  09166 Cardiovascular disease
   05416 Viral myocarditis
    118857179
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    118857179
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tvp04147]
    118857179
Exosome [BR:tvp04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118857179
  Exosomal proteins of epithelial cells
   118857179
  Exosomal proteins of breast milk
   118857179
SSDB
Motif
Pfam: C1-set MHC_II_beta Ig_2 Ig_3 I-set C2-set_3
Other DBs
NCBI-GeneID: 118857179
NCBI-ProteinID: XP_036623722
Position
7:complement(269920610..269925924)
AA seq 262 aa
MRLLHLLLVGFSLGFPGAGGFVTHVESGCMLDEEGSAKDFTYCISFNKDVLTCWDSETNK
MVTVDFGILHQLAEEISVALNNDSALMDRLSKGFQDCASHTKPFWGSLTQRTRPPSVQIA
QTTPFNTREPVMLACYVWGFYPADVAVSWLKNGQPIPDSGIQRAVQSNGDWTYQTRSYLA
LTPSSGDIYTCHVEHSGTSQSILQTWTPGLSLKQTVKISVSVLTLCLGLVVFFLGLVACR
KAGSSDYTPLSGSNYPEGRNFL
NT seq 789 nt   +upstreamnt  +downstreamnt
atgaggttactacacctgctactggtgggcttcagcctgggttttccaggagcagggggc
tttgtgacccatgtggagagtggctgtatgctggatgaagaaggatcagcaaaggacttc
acatattgtatctccttcaacaaggatgtgttgacctgctgggactcggagactaacaag
atggtcactgtcgattttggaatactgcatcaattggctgaggagatttctgttgccctt
aataacgatagtgctctgatggaccgcctgagcaaaggattccaggactgtgccagtcac
acaaagcccttctggggctcgttgacccaaaggacgcggccaccatcagtgcaaatagct
cagaccacaccatttaacacaagggagccagtgatgctggcctgttatgtatggggcttc
tatcctgctgatgtggctgtttcatggctgaagaatgggcagcctattccagacagtggc
atccagagggctgtacaatccaatggggactggacttatcagacacgatcctacttggcc
cttactccctctagtggggatatttatacttgccatgtagagcacagtgggacttcccag
agcatcttacagacctggacacctggcctctctctgaagcagacagtgaagatctctgta
tctgtgctgactctatgccttggtctcgtcgtcttcttccttggcctggttgcctgccga
aaagctggctcctctgactacactcctctctcggggtccaattatcctgaaggtagaaac
ttcttgtaa

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (10)   

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