KEGG   Thalassolituus hydrocarboniclasticus: HUF19_15020
Entry
HUF19_15020       CDS       T08537                                 
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
twan  Thalassolituus hydrocarboniclasticus
Brite
KEGG Orthology (KO) [BR:twan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:twan03021]
    HUF19_15020 (rpoS)
Transcription machinery [BR:twan03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HUF19_15020 (rpoS)
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r4_2 Sec66 7TMR-DISMED2
Other DBs
NCBI-ProteinID: UXD88661
Position
complement(3370650..3371627)
AA seq 325 aa
MAVQQRELREEDVFDDVEALALVEESESEQDSADETTERFAADTSYKTMDATQLYLNEIG
FSPLLSAEEEVHYARLARKGDEMGRRRMIESNLRLVVKISRRYVNRGLSLLDLIEEGNLG
LIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRAARELT
QKLDHEPSAEEIAALLEKPVEDVKRMLKLNERVTSIDTPLGPSSDKSILDTIADERVTDP
GEELQNQDIQANLDRWIEELPEKQREVLSRRFGLRGYETSTLEDVGREIGLTRERVRQIQ
VEALKRLREIMEKQGLNAATLFGDA
NT seq 978 nt   +upstreamnt  +downstreamnt
atggcagtacaacaacgagaactacgcgaagaagacgtttttgatgatgtagaagcactg
gcactggtggaagagtctgagtctgaacaggattctgcagacgaaaccacagaacgcttt
gccgctgacacatcctacaaaacgatggatgctactcagttgtatctcaatgagattggg
ttttccccactgctgtctgcggaagaagaggtgcactatgcacgtctggcccgcaagggt
gatgaaatgggtcgccgtcgcatgattgaaagtaacctgcgactggtggtgaagatttca
cgccgttacgttaaccgcggcttatcactgctggatctgatcgaagagggcaacctgggt
ctgatccgcgcggttgagaagttcgatccggaacgtggcttccgcttctctacctacgcc
acctggtggattcgtcagactatcgaacgggcgattatgaatcagacccgtaccatccgt
ctgccgattcacgtggtcaaagaactcaacgtttatctgcgtgcagcccgtgagctgacc
cagaagctggatcatgagccaagcgcagaagaaatcgcagctctgctggaaaaaccggta
gaagatgtaaaacgcatgctcaaactgaatgagcgtgtaacctcgattgataccccactt
gggccgtcatccgataaatccattctggataccatcgccgatgagcgtgtaaccgatccg
ggtgaagaactgcagaatcaggatattcaggccaatctggatcgctggattgaagaactg
ccagagaagcaacgtgaagttctgtcccgtcgtttcggtctgcgtggttatgaaaccagc
accctggaagatgtgggccgcgaaatcggtctgacccgtgagcgtgtgcgccagattcag
gtcgaagctctgaagcgtctgcgtgagatcatggagaagcagggtctgaacgcagccact
ctgtttggtgatgcctaa

  All links  
Gene (1)   
   NCBI-PROTEINID (1)   
Protein domain (7)   
   Pfam (7)   
All databases (8)   

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