KEGG   Tropheryma whipplei Twist: TWT_217
Entry
TWT_217           CDS       T00116                                 
Symbol
idsA
Name
(GenBank) geranylgeranyl pyrophosphate synthase
  KO
K13787  geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
twh  Tropheryma whipplei Twist
Pathway
twh00900  Terpenoid backbone biosynthesis
twh01100  Metabolic pathways
twh01110  Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:twh00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    TWT_217 (idsA)
  09110 Biosynthesis of other secondary metabolites
   00997 Biosynthesis of various other secondary metabolites
    TWT_217 (idsA)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:twh01006]
    TWT_217 (idsA)
Enzymes [BR:twh01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     TWT_217 (idsA)
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     TWT_217 (idsA)
    2.5.1.29  geranylgeranyl diphosphate synthase
     TWT_217 (idsA)
Prenyltransferases [BR:twh01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   TWT_217 (idsA)
SSDB
Motif
Pfam: polyprenyl_synt Acm1_Central
Other DBs
NCBI-ProteinID: AAO44314
UniProt: Q83N10
Position
complement(302592..303731)
AA seq 379 aa
MSVFHVSVFPTRKVPCHCQDKFGCFMTLLEMVNTKISRFILNNKTSKHTESMYDYLQDFT
FGGKRLRAKLCFTGAECIGPIPENLFELISDIAVAIELFHAAALVHDDLIDKSDSRRGLP
AVHKRFAKFHEENSFVKCKENFGTASAILAGDMLLVWSSRFFYSALNNLLNTTAKQASDF
HLDTMNILWHEMQNEVVIGQYMDVLHEHRWRQLSVQEALDISKEIMIKKSGKYSVQVPLC
LGANTNGATIEHLEVLKRFSLPIGLAFQMRNDIDGAFANDKITGKPSSDLSSAKHTMLIG
LARIHSTKHGRIRLEEILGQADNEEEIRAIVTESGALREAENLIKKWTDQAMEIIKEARL
HSMGKEKLIKIASWLSQAT
NT seq 1140 nt   +upstreamnt  +downstreamnt
gtgtccgtttttcatgtgtctgtttttcctactagaaaggtaccctgccattgtcaggat
aaattcgggtgctttatgacacttctggaaatggtaaatacgaaaataagtcgttttatt
ctgaataacaaaacatcaaaacatacggaaagtatgtatgattatctacaagacttcaca
ttcggtggaaaaaggctgagggcgaagctttgctttaccggtgctgagtgcatagggcca
attccagaaaatctttttgaattaatttctgatatcgctgttgcaatagagctgtttcac
gcagcggcgctcgtgcatgatgatctgattgataaatctgattcccgccgtgggttgccg
gcggtacacaaaagatttgccaagtttcatgaagaaaactcatttgtaaaatgcaaagag
aattttggcaccgcaagtgcaattcttgcaggagacatgctgcttgtatggagcagtagg
ttcttttattcagcattgaacaatctcctaaacaccactgcaaaacaagcctctgatttt
cacctggacacgatgaatatcctatggcacgaaatgcaaaacgaagttgttataggccag
tacatggatgttctgcacgaacacagatggagacagttgtctgtacaagaggccctggat
atatcaaaagaaatcatgataaaaaagtctgggaagtactcggtgcaagttcccctttgt
cttggcgccaatacgaacggtgcaacaatagaacacctagaggttttaaaaagattctct
ctcccaataggccttgcatttcagatgcgcaatgacatagacggcgcgtttgcgaatgac
aaaataaccggtaaaccatccagtgatctatcatctgcaaagcacacaatgctaatcggc
cttgcgcggatacacagcacgaaacacgggcgaataaggctagaggagatacttggacag
gcagataatgaagaggaaataagggctatagtcaccgaaagcggcgccctaagagaagct
gaaaatctcatcaaaaaatggactgatcaggctatggaaattatcaaagaagcgcggctg
cacagtatgggtaaggaaaaactaatcaaaattgcctcctggctgtcacaagcaacataa

  All links  
Gene (5)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (8)   

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