KEGG   Tropheryma whipplei TW08/27: TW232
Entry
TW232             CDS       T00117                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha chain
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
tws  Tropheryma whipplei TW08/27
Pathway
tws03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tws00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TW232 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tws03021]
    TW232 (rpoA)
   03400 DNA repair and recombination proteins [BR:tws03400]
    TW232 (rpoA)
Enzymes [BR:tws01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     TW232 (rpoA)
Transcription machinery [BR:tws03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     TW232 (rpoA)
DNA repair and recombination proteins [BR:tws03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      TW232 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L
Other DBs
NCBI-ProteinID: CAD66909
UniProt: Q820D8
Position
257011..257994
AA seq 327 aa
MLIAHRPTLIEKKVSDIRSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSINIQGVM
HEFSTIPGVKEDVTEIVLNVKRLVISSEIDEPFTVRLYKTGEGEVLAKDIEVPTGIEIGN
GDLVIATLAKDAVFDMQLTIERGRGYVSAEQNRNDGMSLAGHIPVDSIYSPVHKVTYRVE
ATRAGERTDFDRLIIDVETKPSILPRDAVASAGKTLCELFGLARELNSQAEGVEFGVDSM
IPESDEDLRIPIEDLGLSVRSYNCLKREGVNYVSELLGFSEQELLDIRNFGQKSADEVQE
KLAELGHSLKGSVPGFDGSYFDPNYGS
NT seq 984 nt   +upstreamnt  +downstreamnt
ttgctgattgcccaccgcccgacactgattgaaaagaaagtttctgatattcgctcgcga
tttattattgagcctcttgagcctggctttggctataccctgggcaattcgcttcggcgc
acacttctctcttcgattccgggcgcagcggtgacatcgataaacatccagggtgttatg
cacgagtttagcactattccaggtgttaaggaagatgtaaccgagattgttttaaatgtg
aagcgtctggttatttcaagtgagattgacgagccgtttactgtccgtctatataaaacc
ggtgagggtgaggttttggcaaaggacatagaggtgccaaccggcatagaaataggtaat
ggtgatcttgtaattgcaaccctcgccaaagatgcggtttttgacatgcagcttacaata
gagcgaggcaggggatatgtttcagcggaacagaatagaaatgatggaatgtctcttgct
gggcatattccggtagattcgatctattctcctgttcataaagtaacctatcgcgttgag
gctacgcgtgccggtgagaggacggactttgatcgcctgataatcgatgtcgagactaag
ccttcgattcttcccagagatgcagttgcaagtgcagggaagactctttgcgagctgttt
ggccttgcacgcgaactgaattctcaggccgagggtgttgagtttggtgttgattctatg
atcccggaaagtgatgaagatctgcgtattccgattgaggacttggggctctcggtaaga
tcctataactgcttgaagcgcgaaggtgtaaattatgtcagtgaactcctgggtttttcc
gagcaagagctcttggatataagaaatttcggacagaaatctgctgatgaggtccaggag
aagttagctgagctgggtcacagccttaagggaagcgtcccggggtttgatggctcttac
tttgatccgaattatggttcgtag

  All links  
Gene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (7)   

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