KEGG   Thalassospira xiamenensis: TH3_17815
Entry
TH3_17815         CDS       T03639                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
txi  Thalassospira xiamenensis
Pathway
txi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:txi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    TH3_17815
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:txi03400]
    TH3_17815
DNA repair and recombination proteins [BR:txi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     TH3_17815
SSDB
Motif
Pfam: UvrC_RNaseH_dom UvrC_RNaseH UVR HHH_5 GIY-YIG HHH_2 HHH DUF7508
Other DBs
NCBI-ProteinID: AJD53665
UniProt: A0AB72UHA2
Position
complement(3884223..3886142)
AA seq 639 aa
MKPETPSENPAREIGLSLEGDDYDGGAARGVEAIKHALKTMPGSAGVYRMIDDKDRVLYV
GKAKNLKKRVVAYTRLMQLPIRIARMVAQTVRMEIITTHTEAEALLLESNLIKKLKPRYN
ILLRDDKSFPYILITEDHDYPRIVKHRGARAKDGSCFGPFASAWAVNNTINHLQRAFLLR
SCTDAVFSNRSRPCLLYQIKRCSAPCVDRVAKAEYDALVDICRDFLTGRSQKILKQLEAD
MLAASERMDFEQAAMYRDRIRALSQIRSHQDINLEGVEEADVIALHHEGGQSCVQVFFFR
SGSNYGNRSYFPRHEQGAEIAEILSAFVGQFYADKPAPKQVLLSHEIEGQELVETALSIN
NNRKITLQVPKRGGRRKLVEHALTNAKDALGRRMAESASQRKLLEDLADKLELDGTPERI
EVYDNSHIQGTNMVGGMIVAGPEGFMKSAYRKFNIKGDIAPGDDFAMMREVLTRRFARAQ
KEDPDRENGTWPDLCLIDGGLGQLGVAREVLEDLGIEDVMLVGVAKGVDRNAGKEVLHIP
GKPPVRLDMQDPVLYFIQRLRDEAHRWAIGTHRAKRSKQIGKSVLDNVPGVGGARKKALL
HHFGSARGVADAGLTDLEAVDGISAALARKIYDHFHDTE
NT seq 1920 nt   +upstreamnt  +downstreamnt
atgaagcctgaaaccccatccgaaaaccccgctcgggaaatcggattgtcgcttgaaggc
gatgattatgacgggggggctgcgcgcggtgtcgaggccatcaaacatgcgctgaaaacc
atgccgggatcggccggtgtctatcgcatgattgatgacaaggaccgggttctttatgtc
ggcaaggccaagaaccttaaaaagcgcgtggtggcctatacccgtctgatgcagttgccg
atacggattgcccgtatggtcgcacagaccgtgcggatggaaatcatcaccacccacacc
gaagccgaggcgcttcttcttgaatccaacctgatcaagaagcttaaaccgcgttacaac
atccttctgcgcgatgacaaaagtttcccctatatcctgatcaccgaggatcatgattat
ccgcgcatcgtcaaacatcgcggggcacgggccaaggatggcagttgctttggtccgttt
gcgtccgcttgggcggtgaacaacacgatcaaccatttgcagcgtgcctttttgctgcgc
tcctgcacggatgccgtattttccaaccggtcgcgtccgtgtttgctgtatcaaatcaaa
cgctgttccgcgccgtgtgtggatcgggttgccaaagccgaatatgacgcgcttgtcgat
atctgccgtgacttcctgaccgggcgcagccagaaaatcctcaagcagcttgaagccgac
atgcttgccgcgtctgaacggatggatttcgagcaggcggcgatgtatcgcgatcgtatc
cgtgcgttaagccagatcaggtcgcatcaggacatcaatctggaaggcgttgaagaggcc
gatgtgatcgccctgcatcacgaaggcgggcaaagctgtgttcaggtcttcttcttccgc
tcgggctctaactatggcaaccggtcctatttcccgcgccatgaacagggggcggaaatt
gccgaaatcctgtcggcctttgtcgggcagttctatgccgataaaccggccccgaaacag
gtgctgctatcgcatgagatcgaaggtcaggaactggtcgaaaccgcattgtcgatcaat
aataaccgtaagattaccttgcaggtgcccaagcgtggcggtcgacgcaagcttgttgaa
catgcgttgaccaatgccaaggacgcgctggggcggcgcatggccgaaagtgcttcgcaa
cgcaaattgctggaagatctggccgataaactcgaactggacggcacgccagaacggata
gaggtttacgataacagtcatattcagggcaccaacatggtgggcggcatgatcgttgcc
ggacctgaggggtttatgaaaagtgcctatcgcaaattcaatatcaagggcgatatcgcg
ccgggtgatgattttgccatgatgcgcgaagttctgaccaggcgttttgcgcgtgcgcaa
aaggaagacccggaccgggaaaacggcacatggccggacctttgcctgatcgatggtggc
ttggggcagcttggcgtggcccgcgaagtgcttgaagaccttgggatcgaagacgtgatg
cttgtcggcgttgccaagggtgttgatcgcaatgcgggcaaggaagtgctgcatatcccc
ggaaaaccgcccgtgcgtcttgatatgcaggatccggttttatatttcatccagcgtttg
cgcgatgaagcgcaccgttgggcgattggcacgcatcgcgccaaacggtccaagcagatc
ggcaaaagcgttcttgataatgtgcccggcgtgggtggggcacgcaaaaaggcgttgctg
catcatttcggatcggcgcgcggcgtggcggatgccggtttaaccgatcttgaggcggtg
gatggcatcagtgccgcccttgcccgcaagatttacgatcattttcatgacacggaataa

  All links  
Gene (126)   
   RefGene (124)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (135)   

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