ID A0A061FVM9_THECC Unreviewed; 1063 AA.
AC A0A061FVM9;
DT 03-SEP-2014, integrated into UniProtKB/TrEMBL.
DT 03-SEP-2014, sequence version 1.
DT 08-OCT-2025, entry version 59.
DE SubName: Full=Stabilizer of iron transporter SufD / Polynucleotidyl transferase isoform 1 {ECO:0000313|EMBL:EOY21590.1};
GN ORFNames=TCM_013468 {ECO:0000313|EMBL:EOY21590.1};
OS Theobroma cacao (Cacao) (Cocoa).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma.
OX NCBI_TaxID=3641 {ECO:0000313|EMBL:EOY21590.1, ECO:0000313|Proteomes:UP000026915};
RN [1] {ECO:0000313|EMBL:EOY21590.1, ECO:0000313|Proteomes:UP000026915}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Matina 1-6 {ECO:0000313|Proteomes:UP000026915};
RX PubMed=23731509; DOI=10.1186/gb-2013-14-6-r53;
RA Motamayor J.C., Mockaitis K., Schmutz J., Haiminen N., Iii D.L.,
RA Cornejo O., Findley S.D., Zheng P., Utro F., Royaert S., Saski C.,
RA Jenkins J., Podicheti R., Zhao M., Scheffler B.E., Stack J.C., Feltus F.A.,
RA Mustiga G.M., Amores F., Phillips W., Marelli J.P., May G.D., Shapiro H.,
RA Ma J., Bustamante C.D., Schnell R.J., Main D., Gilbert D., Parida L.,
RA Kuhn D.N.;
RT "The genome sequence of the most widely cultivated cacao type and its use
RT to identify candidate genes regulating pod color.";
RL Genome Biol. 14:R53.1-R53.24(2013).
CC -!- SIMILARITY: Belongs to the argonaute family. Ago subfamily.
CC {ECO:0000256|ARBA:ARBA00008201}.
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DR EMBL; CM001881; EOY21589.1; -; Genomic_DNA.
DR EMBL; CM001881; EOY21590.1; -; Genomic_DNA.
DR EMBL; CM001881; EOY21591.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A061FVM9; -.
DR FunCoup; A0A061FVM9; 3037.
DR STRING; 3641.A0A061FVM9; -.
DR Gramene; EOY21589; EOY21589; TCM_013468.
DR Gramene; EOY21590; EOY21590; TCM_013468.
DR Gramene; EOY21591; EOY21591; TCM_013468.
DR eggNOG; KOG1041; Eukaryota.
DR HOGENOM; CLU_004544_0_0_1; -.
DR InParanoid; A0A061FVM9; -.
DR OMA; CFAQQQH; -.
DR Proteomes; UP000026915; Chromosome 3.
DR GO; GO:0005737; C:cytoplasm; IBA:GO_Central.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:1990904; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0004521; F:RNA endonuclease activity; IBA:GO_Central.
DR GO; GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
DR GO; GO:0051607; P:defense response to virus; IEA:UniProtKB-ARBA.
DR GO; GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
DR GO; GO:0031047; P:regulatory ncRNA-mediated gene silencing; IBA:GO_Central.
DR CDD; cd02846; PAZ_argonaute_like; 1.
DR CDD; cd04657; Piwi_ago-like; 1.
DR FunFam; 3.40.50.2300:FF:000110; Argonaute 10; 1.
DR FunFam; 3.30.420.10:FF:000013; protein argonaute 10-like; 1.
DR FunFam; 2.170.260.10:FF:000001; Protein argonaute-2; 1.
DR Gene3D; 3.40.50.2300; -; 1.
DR Gene3D; 2.170.260.10; paz domain; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR014811; ArgoL1.
DR InterPro; IPR032472; ArgoL2.
DR InterPro; IPR024357; Argonaut_Gly-rich.
DR InterPro; IPR032473; Argonaute_Mid_dom.
DR InterPro; IPR032474; Argonaute_N.
DR InterPro; IPR003100; PAZ_dom.
DR InterPro; IPR036085; PAZ_dom_sf.
DR InterPro; IPR003165; Piwi.
DR InterPro; IPR045246; Piwi_ago-like.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR22891; EUKARYOTIC TRANSLATION INITIATION FACTOR 2C; 1.
DR Pfam; PF08699; ArgoL1; 1.
DR Pfam; PF16488; ArgoL2; 1.
DR Pfam; PF16487; ArgoMid; 1.
DR Pfam; PF16486; ArgoN; 1.
DR Pfam; PF12764; Gly-rich_Ago1; 1.
DR Pfam; PF02170; PAZ; 1.
DR Pfam; PF02171; Piwi; 1.
DR SMART; SM01163; DUF1785; 1.
DR SMART; SM00949; PAZ; 1.
DR SMART; SM00950; Piwi; 1.
DR SUPFAM; SSF101690; PAZ domain; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50821; PAZ; 1.
DR PROSITE; PS50822; PIWI; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000026915};
KW Repressor {ECO:0000256|ARBA:ARBA00022491};
KW Ribonucleoprotein {ECO:0000256|ARBA:ARBA00023274};
KW RNA-mediated gene silencing {ECO:0000256|ARBA:ARBA00023158};
KW Transferase {ECO:0000313|EMBL:EOY21590.1};
KW Translation regulation {ECO:0000256|ARBA:ARBA00022845}.
FT DOMAIN 401..514
FT /note="PAZ"
FT /evidence="ECO:0000259|PROSITE:PS50821"
FT DOMAIN 690..1011
FT /note="Piwi"
FT /evidence="ECO:0000259|PROSITE:PS50822"
FT REGION 1..130
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1015..1045
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 9..21
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 37..47
FT /note="Gly residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 59..74
FT /note="Gly residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 91..120
FT /note="Gly residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1063 AA; 117089 MW; 22BF57D9C9BECFB4 CRC64;
MVRKKKSDAA SAGGESSQSQ DTGVGSGRGL PRHPQQQGGG GGGGYQAGRG WAPQSQQAGR
GGYGGGGGGG GRGRGVSQQQ FAGGPPEYQG RGRGGPSQQG GRGGYGSGRG GGSRGGGSFP
GGSSRPPVPE LHQATLSFQA AVTPQPAPSE AGSSSGPHDY APLVQQVQQL SIQQETSQAV
QPVPPSSKSV RFPLRPGKGC TGIKCIVKAN HFFAELPDKD LHQYDVTITP EVTSRGVNRA
VMGQLVKLYR ESHLGKRLPA YDGRKSLYTA GPLPFVSKEF KITLIDEDDG SGVPRREREF
RVVIKLAARA DLHHLGLFLQ GKQADAPQEA LQVLDIVLRE LPTTRYCPVG RSFYSPDLGR
RQPLGEGLES WRGFYQSIRP TQMGLSLNID MSSTAFIEPL PVIDFVTQLL NRDVSSRPLS
DADRVKIKKA LRGVKVEVTH RGNMRRKYRI SGLTSQATRE LTFPVDDRGT MKSVVEYFYE
TYGFIIQHTQ WPCLQVGNQQ RPNYLPMEVC KIVEGQRYSK RLNERQITAL LKVTCQRPQE
REYDIMKTVH HNAYHEDPYA KEFGIKISEK LASVEARILP APWLKYHDTG REKDCLPQVG
QWNMMNKKMV NGGTVNNWIC INFSRQVQDS VARGFCYELA QMCYISGMAF TPEPVLPPIS
ARPEQVEKVL KTRYHDAMTK LQPQNKELDL LIVILPDNNG SLYGDLKRIC ETDLGIVSQC
CLTKHVYKMS KQYLANVALK INVKVGGRNT VLVDAISRRI PLVSDRPTII FGADVTHPHP
GEDSSPSIAA VVASQDWPEV TKYAGLVCAQ AHRQELIQDL YKTWQDPVRG TVSGGMIKEL
LISFRRATGQ KPQRIIFYRD GVSEGQFYQV LLYELDAIRK ACASLEPNYQ PPVTFVVVQK
RHHTRLFANN HNDRNAVDKS GNILPGTVVD SKICHPTEFD FYLCSHAGIQ GTSRPAHYHV
LWDENKFTAD ALQSLTNNLC YTYARCTRSV SIVPPAYYAH LAAFRARFYM EPETSDSGSM
TSGTAAGRGG VGGARSTRGP GASAAVRPLP ALKENVKRVM FYC
//
