ID A0A078HMG9_BRANA Unreviewed; 1736 AA.
AC A0A078HMG9;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 08-OCT-2025, entry version 37.
DE SubName: Full=BnaC08g19850D protein {ECO:0000313|EMBL:CDY38811.1};
GN Name=BnaC08g19850D {ECO:0000313|EMBL:CDY38811.1};
GN ORFNames=GSBRNA2T00066627001 {ECO:0000313|EMBL:CDY38811.1};
OS Brassica napus (Rape).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=3708 {ECO:0000313|EMBL:CDY38811.1, ECO:0000313|Proteomes:UP000028999};
RN [1] {ECO:0000313|EMBL:CDY38811.1, ECO:0000313|Proteomes:UP000028999}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Darmor-bzh {ECO:0000313|Proteomes:UP000028999};
RX PubMed=25146293; DOI=10.1126/science.1253435;
RA Chalhoub B., Denoeud F., Liu S., Parkin I.A., Tang H., Wang X., Chiquet J.,
RA Belcram H., Tong C., Samans B., Correa M., Da Silva C., Just J.,
RA Falentin C., Koh C.S., Le Clainche I., Bernard M., Bento P., Noel B.,
RA Labadie K., Alberti A., Charles M., Arnaud D., Guo H., Daviaud C.,
RA Alamery S., Jabbari K., Zhao M., Edger P.P., Chelaifa H., Tack D.,
RA Lassalle G., Mestiri I., Schnel N., Le Paslier M.C., Fan G., Renault V.,
RA Bayer P.E., Golicz A.A., Manoli S., Lee T.H., Thi V.H., Chalabi S., Hu Q.,
RA Fan C., Tollenaere R., Lu Y., Battail C., Shen J., Sidebottom C.H.,
RA Wang X., Canaguier A., Chauveau A., Berard A., Deniot G., Guan M., Liu Z.,
RA Sun F., Lim Y.P., Lyons E., Town C.D., Bancroft I., Wang X., Meng J.,
RA Ma J., Pires J.C., King G.J., Brunel D., Delourme R., Renard M., Aury J.M.,
RA Adams K.L., Batley J., Snowdon R.J., Tost J., Edwards D., Zhou Y., Hua W.,
RA Sharpe A.G., Paterson A.H., Guan C., Wincker P.;
RT "Plant genetics. Early allopolyploid evolution in the post-Neolithic
RT Brassica napus oilseed genome.";
RL Science 345:950-953(2014).
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DR EMBL; LK032433; CDY38811.1; -; Genomic_DNA.
DR STRING; 3708.A0A078HMG9; -.
DR PaxDb; 3708-A0A078HMG9; -.
DR Gramene; CDY38811; CDY38811; GSBRNA2T00066627001.
DR OMA; LCANETC; -.
DR Proteomes; UP000028999; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IBA:GO_Central.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-KW.
DR FunFam; 4.10.1000.10:FF:000008; zinc finger CCCH domain-containing protein 3; 1.
DR FunFam; 4.10.1000.10:FF:000022; Zinc finger CCCH domain-containing protein 7; 1.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 2.
DR InterPro; IPR000571; Znf_CCCH.
DR PANTHER; PTHR46156; CCCH ZINGC FINGER; 1.
DR PANTHER; PTHR46156:SF1; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 3; 1.
DR SMART; SM00356; ZnF_C3H1; 5.
DR PROSITE; PS50103; ZF_C3H1; 3.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000028999};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 1505..1534
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 1560..1586
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 1587..1614
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 1505..1534
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 1560..1586
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 1587..1614
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 1..52
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 192..215
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 294..330
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 498..533
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 765..786
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 894..918
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1093..1121
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1371..1410
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1426..1452
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1624..1662
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..12
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 15..25
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 192..206
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 315..324
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 518..531
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 765..779
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1093..1120
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1387..1396
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1397..1407
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1630..1646
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1736 AA; 190643 MW; 2FD3941F65A4AA26 CRC64;
MDSSHYNPSY GQWNPPLPLL PPPPQRLHYL PPKPAVNHPS PYYSQQPPPQ QHLQCIPEKF
SYESQKVSQP LSFKESRDIS QSAGVGYSDR RLDSWTVDAA QGRRDSSGVG INRGLDGSSW
SIDEFRNLGH LRKESGAARI DGNYQDRGQL KAECFRGLDD GHRSLSSRVG YSSEGARNLR
WNEARRRDEY YHLDRGRREG SNDSKRTPGK VTQKKSALLR LETPRSHLNG RENARNRCSY
SGRRFNSNSF KCKEHFGYSD RGLVENQRGR TSVNLDVSFQ SNRLVAKSVA SPASAGIHPC
RSVTPRSSKA GRALVPDKSE KASVTEENGN QSILKSHQDL LDRTGTGCKA LLPKGMEMED
NVKKKTNTSP KKLLISWSTV ADLSGGSEAR IRFGCSVRSQ PCEDVDMDCL PSTNLSVMDV
NAEDDSKGIN KNVDSLSLEN DSRGLPKCPV SSASLEIPNV STELANANNN VSGDLANAHS
STVCTFTNTM VNPLVENENG NREESMETTA RNSAAEMADN RDSDKGEKAC AKDTSSSLAK
VDVKESSIVL PVERTDGCSG SGESGLAMAV PSDVCMENVS AERLASDEDL GIASHYPAEI
PSVDQLSGST IRGLEVCLPE PDVSLSKGIT DGSVECLVQR DVRQKDSTFC NSLPGSPPLV
TKTNLAVGIN GMSAYETVTD AESGLLESQP CSTVSDAFGT VWNLAVNKNL DEDPSRASSC
LVSDSPVIPC HISPLVAVTE QIQNKTSIQA NYSDSRDGIM HEENNCAEKP DVDTQDEKTY
PSGGTLNYKT RGTDIVAVTG GSVFPSQSLS SSPRRSFRQI RSEIHVAATV DETCKDKPKP
KHSGGTSKYR TGGTNIFAFS GDSVPCGSLS NPPRLYRQIR SEVHVASMVD DTSTCKEKAK
PSGGTSKCRT PEADVTSDVG GQEKYSLNRV KTDIFDGEVW SSVVNVSGAE ILGDSGVPLS
RSHSNGKDHV ISVRDRDSQS KTSLSSWYHV ENMEKKSNYS AQKRFSRALP FVSGPKKDAN
PSNKCHTWHR KFDSSASPLV AVKPLSPTLI TQPKFPIVTA QSSSSYVRKG NSLLRKPSYG
SLVKTGEIIT LERQSNPSSD SSTSKVSNAI VTSSGKSPLS YSRDHLISGL PESIIDSATS
EEANVAHSGG DASKTSDTLI QTDYASDCQQ KRNHTTLDSS NLKRTVYVKR KANQLIAASD
IHGATKDQIP TSDGYFKRSK NQLVRTSASC VSHSPDDALD SQAATTMVPK RSSSSAFSDS
AVTRPYKRSK FSLVWTQNDP QSRLRTSHMR YQRILPQLVP WKRVTYWRRL MKSVSGSALR
NSSFSKSSQK LSMMRKRHTV YTRSTNGYSL RKSKVLSLGG SHLKWSKSIE RDSRKANQEA
TLTAAEFSKK ESEKHSGQST TRMTSRNHLT RERVFRIGSL RYKMDSSRRT LQRISDDDSP
CSGPTENGKG AERPFIPKRL VIGNEEYVRV GNGNQLVRDP KKRTRALANE KVRWSLHNVR
LRSAKKKKKY CQFFTRFGKC SKDDGKCPYV HDPSKIAVCT KFLNGLCANE TCKLTHKVIP
ARMPDCSYFL QGLCNNDACP YRHVHVNPSA AICDGFLKGY CSDGDECRKK HSYTCPVFEA
TGSCSQGSKC KLHHPKNQSK GRKRKRPAEP SERNSRGRYF GSRHKVFSES EPMVVDRRPT
NSADFGIEEG LDFIFLGATE YEAGDNSDLA GEESVSSASE EPVSVYNLIR PVALMQ
//
