ID A0A087HJ23_ARAAL Unreviewed; 1064 AA.
AC A0A087HJ23;
DT 29-OCT-2014, integrated into UniProtKB/TrEMBL.
DT 29-OCT-2014, sequence version 1.
DT 08-OCT-2025, entry version 39.
DE RecName: Full=C3H1-type domain-containing protein {ECO:0000259|PROSITE:PS50103};
GN OrderedLocusNames=AALP_Aa2g214200 {ECO:0000313|EMBL:KFK42125.1};
OS Arabis alpina (Alpine rock-cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis.
OX NCBI_TaxID=50452 {ECO:0000313|EMBL:KFK42125.1, ECO:0000313|Proteomes:UP000029120};
RN [1] {ECO:0000313|Proteomes:UP000029120}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Pajares {ECO:0000313|Proteomes:UP000029120};
RX PubMed=27246759; DOI=10.1038/nplants.2014.23;
RA Willing E.M., Rawat V., Mandakova T., Maumus F., James G.V.,
RA Nordstroem K.J., Becker C., Warthmann N., Chica C., Szarzynska B.,
RA Zytnicki M., Albani M.C., Kiefer C., Bergonzi S., Castaings L.,
RA Mateos J.L., Berns M.C., Bujdoso N., Piofczyk T., de Lorenzo L.,
RA Barrero-Sicilia C., Mateos I., Piednoel M., Hagmann J., Chen-Min-Tao R.,
RA Iglesias-Fernandez R., Schuster S.C., Alonso-Blanco C., Roudier F.,
RA Carbonero P., Paz-Ares J., Davis S.J., Pecinka A., Quesneville H.,
RA Colot V., Lysak M.A., Weigel D., Coupland G., Schneeberger K.;
RT "Genome expansion of Arabis alpina linked with retrotransposition and
RT reduced symmetric DNA methylation.";
RL Nat. Plants 1:14023-14023(2015).
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DR EMBL; CM002870; KFK42125.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A087HJ23; -.
DR Gramene; KFK42125; KFK42125; AALP_AA2G214200.
DR OMA; ANPECKL; -.
DR Proteomes; UP000029120; Chromosome 2.
DR GO; GO:0005634; C:nucleus; IEA:TreeGrafter.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-KW.
DR FunFam; 4.10.1000.10:FF:000022; Zinc finger CCCH domain-containing protein 7; 1.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 2.
DR InterPro; IPR000571; Znf_CCCH.
DR PANTHER; PTHR46156; CCCH ZINGC FINGER; 1.
DR PANTHER; PTHR46156:SF1; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 3; 1.
DR SMART; SM00356; ZnF_C3H1; 4.
DR PROSITE; PS50103; ZF_C3H1; 3.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000029120};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 862..890
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 916..942
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 943..970
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 862..890
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 916..942
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 943..970
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 38..75
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 469..505
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 553..615
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 652..684
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 983..1003
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1031..1064
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 48..73
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 469..480
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 989..1001
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1033..1044
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1046..1056
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1064 AA; 118148 MW; 30A91FE665DE6869 CRC64;
MDSSLKNPNF YYNQSQPLYT LFPPPISYQF HYNTLNQTHQ NHTHRHGLPP PPPINQPPPY
YLHPPPPPPP PPYQSGCVGY TEKRIDSRIV NPNYQLDYRN RIRDCSNGGL TSCLNSSSRV
RDGFSSLGNA RKDLGDVRVE ESKRNCGQSL RVGTSFGYGN VPSHVVGNGG IGKQRWVEMH
KDDYYRSEIE PYVDNGKIKG SDEMKPAQFS EKRFNAFKVK RKASRCIAGN VLLGEVTKKK
DNFPPPTTVE PNFTTRVDSL DRTFDSQAQS QACENGVKSS AETVSRKETM DTTPLTSTAE
VDHNLGSDAG KYTCVISSSS SSKNVVGKGS SKVQPVERTS VLLRSICKNK EGLSNGLVVD
RELSSVDQSC NLVCRGLKAC SSESDVSLSK DTNVGASESH FNQEVKEKAP TCNSLPVLEV
ENSIAIETQP CQAGSKVLPN VVHSMDKDLV DKCEVARVEN FVVALTPQES QSKTLSSTSE
KTQKRANKYT HAAQESCTRS QSDTKKDANL PINVAKHHTW HQKSDTAASR LVAVKPKVTV
QSSSTYVRIG NSLLRKPSPG YLGEAQTLQR HSRAPSGSTS GKCALSSGMD PLSNGLPRSS
SGEADDPDYF RNGLKSSDTL AQTDIHGASK SEIPHSGGYF KRSKNQLVRN SESLANQAKS
LSDDALDSQT GEKMASTRSS SSALSAVMRP FDQSKFSSAS TLKEPLSRKA NRVHMSPQKI
VAQPVQRGTY GRRSMNPASV PRNGSSFTIG QKFLMMRKRR TIYRRSTNGY TLKRSKVPKS
IERNSNKPEC LADVESWRSG LPEFGKDAKK SFIPRRLVMG NDESLWIRNG NRLVGDPKKR
TRVLANEKVR WSLHNTRSRL VKKRNYCQFF TRFGKCNKDD GKCPYIHDPS KVAVCIKFVS
RLCANPDCKL THKVVPERMP DCSYFLQGLC NNEPCLYRHV YCNQNAAVCE GFLRGYCSDG
NECRKKHTYT CPVFEATGSC PQESECKLHH PKNRSKGKKR KRESEPWQKI SFFGGEGLDF
ILLDVYEHEA SENMDSSTPE SVSGDSEAHD SIDELIRPVG LMQE
//
