ID A0A0C3G9Y3_OIDMZ Unreviewed; 996 AA.
AC A0A0C3G9Y3;
DT 01-APR-2015, integrated into UniProtKB/TrEMBL.
DT 01-APR-2015, sequence version 1.
DT 10-JUN-2026, entry version 46.
DE RecName: Full=Circadian oscillator component FRH {ECO:0000256|ARBA:ARBA00095033};
DE AltName: Full=FRQ-interacting RNA helicase {ECO:0000256|ARBA:ARBA00095166};
GN ORFNames=OIDMADRAFT_208362 {ECO:0000313|EMBL:KIM93010.1};
OS Oidiodendron maius (strain Zn).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Leotiomycetes;
OC Leotiomycetes incertae sedis; Myxotrichaceae; Oidiodendron.
OX NCBI_TaxID=913774 {ECO:0000313|EMBL:KIM93010.1, ECO:0000313|Proteomes:UP000054321};
RN [1] {ECO:0000313|EMBL:KIM93010.1, ECO:0000313|Proteomes:UP000054321}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Zn {ECO:0000313|EMBL:KIM93010.1,
RC ECO:0000313|Proteomes:UP000054321};
RG DOE Joint Genome Institute;
RA Kuo A., Martino E., Perotto S., Kohler A., Nagy L.G., Floudas D.,
RA Copeland A., Barry K.W., Cichocki N., Veneault-Fourrey C., LaButti K.,
RA Lindquist E.A., Lipzen A., Lundell T., Morin E., Murat C., Sun H.,
RA Tunlid A., Henrissat B., Grigoriev I.V., Hibbett D.S., Martin F.,
RA Nordberg H.P., Cantor M.N., Hua S.X.;
RL Submitted (APR-2014) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|Proteomes:UP000054321}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Zn {ECO:0000313|Proteomes:UP000054321};
RG DOE Joint Genome Institute;
RG Mycorrhizal Genomics Consortium;
RA Kohler A., Kuo A., Nagy L.G., Floudas D., Copeland A., Barry K.W.,
RA Cichocki N., Veneault-Fourrey C., LaButti K., Lindquist E.A., Lipzen A.,
RA Lundell T., Morin E., Murat C., Riley R., Ohm R., Sun H., Tunlid A.,
RA Henrissat B., Grigoriev I.V., Hibbett D.S., Martin F.;
RT "Evolutionary Origins and Diversification of the Mycorrhizal Mutualists.";
RL Submitted (JAN-2015) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the helicase family. SKI2 subfamily.
CC {ECO:0000256|ARBA:ARBA00010140}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; KN832901; KIM93010.1; -; Genomic_DNA.
DR AlphaFoldDB; A0A0C3G9Y3; -.
DR FunCoup; A0A0C3G9Y3; 1161.
DR STRING; 913774.A0A0C3G9Y3; -.
DR HOGENOM; CLU_002902_0_1_1; -.
DR InParanoid; A0A0C3G9Y3; -.
DR OrthoDB; 64767at2759; -.
DR Proteomes; UP000054321; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:InterPro.
DR GO; GO:0003724; F:RNA helicase activity; IEA:InterPro.
DR GO; GO:0000460; P:maturation of 5.8S rRNA; IEA:TreeGrafter.
DR GO; GO:0006401; P:RNA catabolic process; IEA:InterPro.
DR CDD; cd18024; DEXHc_Mtr4-like; 1.
DR CDD; cd13154; KOW_Mtr4; 1.
DR CDD; cd18795; SF2_C_Ski2; 1.
DR FunFam; 1.10.3380.30:FF:000003; ATP dependent RNA helicase (Dob1); 1.
DR FunFam; 3.40.50.300:FF:000083; ATP-dependent RNA helicase DOB1; 1.
DR FunFam; 3.40.50.300:FF:000141; ATP-dependent RNA helicase DOB1; 1.
DR FunFam; 2.40.30.300:FF:000001; Mtr4 exosome RNA helicase; 1.
DR Gene3D; 1.10.3380.30; -; 1.
DR Gene3D; 2.40.30.300; -; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 2.
DR InterPro; IPR025696; Beta-barrel_MTR4.
DR InterPro; IPR011545; DEAD/DEAH_box_helicase_dom.
DR InterPro; IPR014001; Helicase_ATP-bd.
DR InterPro; IPR001650; Helicase_C-like.
DR InterPro; IPR048392; MTR4-like_stalk.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR050699; RNA-DNA_Helicase.
DR InterPro; IPR016438; SKI2-like.
DR InterPro; IPR012961; Ski2/MTR4_C.
DR PANTHER; PTHR12131; ATP-DEPENDENT RNA AND DNA HELICASE; 1.
DR PANTHER; PTHR12131:SF7; EXOSOME RNA HELICASE MTR4; 1.
DR Pfam; PF00270; DEAD; 1.
DR Pfam; PF08148; DSHCT; 1.
DR Pfam; PF00271; Helicase_C; 1.
DR Pfam; PF21408; MTR4-like_stalk; 1.
DR Pfam; PF13234; MTR4_beta-barrel; 1.
DR PIRSF; PIRSF005198; Antiviral_helicase_SKI2; 1.
DR SMART; SM00487; DEXDc; 1.
DR SMART; SM01142; DSHCT; 1.
DR SMART; SM00490; HELICc; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS51192; HELICASE_ATP_BIND_1; 1.
DR PROSITE; PS51194; HELICASE_CTER; 1.
PE 3: Inferred from homology;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Biological rhythms {ECO:0000256|ARBA:ARBA00023108};
KW Helicase {ECO:0000256|ARBA:ARBA00022806};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000054321};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 82..238
FT /note="Helicase ATP-binding"
FT /evidence="ECO:0000259|PROSITE:PS51192"
FT DOMAIN 318..522
FT /note="Helicase C-terminal"
FT /evidence="ECO:0000259|PROSITE:PS51194"
FT REGION 1..34
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 292..313
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 996 AA; 113101 MW; B9453F9708803352 CRC64;
MEEESTAPVV TDTFQTEQSR EVAASGGLQG QEDGSLVLQH NIQHQVSLPP DYDYIPISQH
KSPESPARTW PFELDPFQKV SIASIEREES VLVSAHTSAG KTVVAEYAIA QSLKNNQRVI
YTSPIKALSN QKYREFAAEF GDVGLMTGDV TINPTATCLV MTTEILRSML YRGSEIMREV
QWVIFDEIHY MRDKSRGVVW EETIILLPDK VRYVFLSATI PNAMQFAEWI TKIHNQPCHI
VYTDFRPTPL QHYFFPAGSD GIHLVVDEKG NFREDNFTRA MSAIEDKMGA DPADINAKRK
GRGRDKKTNK GGNKEGSDIY KIVRMIMLKH YNPVIVFSFS KRECEAYAMQ MSSMAFNDDS
EKDMVTKVFQ SAIESLSDDD KNLPQITHIL PLLRRGIGVH HSGLLPILKE TIEILFQENL
IKVLFATETF SIGLNMPAKT VVFTSVEKYD GIKTRYLTPS EFVQMSGRAG RRGLDDRGIV
IMMINNKMEP ASAKEIVRGQ QDNLNSAFYL GYNMILNLLR LEGISPEFML EHCFYQFQNT
SNVSQMEKAL QELQIEKDEV EIPDEATVKE YYELRQQITT YSGDMRDVIN HPNYCLQFMQ
PGRLVHIKYL DHDFGWGAVV KYTPRKPAQN QAVDYTPQQS YIIDVLLKLS EGSSVGTKTS
TDLPLGIRPP GDGEKSKMEV VPVLLSCIEA MGHIRIYLPK DLNSAEQRNT VRKSLDEVKR
RFPDGIAVLD PIENMGITDD SFKTLLRKIE VLESRLLSNP LHNSPRLPEL YVMYANKMDM
AQKIKDKKKD INAALSIIQL DELKSRKRVL RRLGFINDQE VVELKARVAC EISSTGDGHE
LLLSELLFNR FFNELTPEVC AAVLSCFIFE EKSQAPALKG ELEKHFAEVK AQARIIARVS
QESKLTINEK EYTESFKFEL MEVVLAWAHG KTFAEICKMT DVYEGSLVRL IRRLEELLRQ
MAQAAKVMGS EELAAKFEES LTKIKRDIVS AGSLYL
//
