ID A0A0D3DQT0_BRAOL Unreviewed; 1750 AA.
AC A0A0D3DQT0;
DT 29-APR-2015, integrated into UniProtKB/TrEMBL.
DT 29-APR-2015, sequence version 1.
DT 08-OCT-2025, entry version 40.
DE RecName: Full=C3H1-type domain-containing protein {ECO:0000259|PROSITE:PS50103};
OS Brassica oleracea var. oleracea.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica.
OX NCBI_TaxID=109376 {ECO:0000313|EnsemblPlants:Bo8g070930.1, ECO:0000313|Proteomes:UP000032141};
RN [1] {ECO:0000313|EnsemblPlants:Bo8g070930.1, ECO:0000313|Proteomes:UP000032141}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=cv. TO1000 {ECO:0000313|EnsemblPlants:Bo8g070930.1,
RC ECO:0000313|Proteomes:UP000032141};
RX PubMed=24916971; DOI=10.1186/gb-2014-15-6-r77;
RA Parkin I.A., Koh C., Tang H., Robinson S.J., Kagale S., Clarke W.E.,
RA Town C.D., Nixon J., Krishnakumar V., Bidwell S.L., Denoeud F., Belcram H.,
RA Links M.G., Just J., Clarke C., Bender T., Huebert T., Mason A.S.,
RA Pires J.C., Barker G., Moore J., Walley P.G., Manoli S., Batley J.,
RA Edwards D., Nelson M.N., Wang X., Paterson A.H., King G., Bancroft I.,
RA Chalhoub B., Sharpe A.G.;
RT "Transcriptome and methylome profiling reveals relics of genome dominance
RT in the mesopolyploid Brassica oleracea.";
RL Genome Biol. 15:R77-R77(2014).
RN [2] {ECO:0000313|EnsemblPlants:Bo8g070930.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (MAR-2015) to UniProtKB.
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DR RefSeq; XP_013605268.1; XM_013749814.1.
DR STRING; 109376.A0A0D3DQT0; -.
DR EnsemblPlants; Bo8g070930.1; Bo8g070930.1; Bo8g070930.
DR GeneID; 106312331; -.
DR Gramene; Bo8g070930.1; Bo8g070930.1; Bo8g070930.
DR KEGG; boe:106312331; -.
DR eggNOG; KOG1492; Eukaryota.
DR HOGENOM; CLU_001506_0_0_1; -.
DR OMA; LCANETC; -.
DR OrthoDB; 3247158at2759; -.
DR Proteomes; UP000032141; Chromosome C8.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-ARBA.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-KW.
DR FunFam; 4.10.1000.10:FF:000008; zinc finger CCCH domain-containing protein 3; 1.
DR FunFam; 4.10.1000.10:FF:000022; Zinc finger CCCH domain-containing protein 7; 1.
DR Gene3D; 4.10.1000.10; Zinc finger, CCCH-type; 2.
DR InterPro; IPR000571; Znf_CCCH.
DR PANTHER; PTHR46156; CCCH ZINGC FINGER; 1.
DR PANTHER; PTHR46156:SF1; ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 3; 1.
DR SMART; SM00356; ZnF_C3H1; 5.
DR PROSITE; PS50103; ZF_C3H1; 3.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723, ECO:0000256|PROSITE-
KW ProRule:PRU00723}; Reference proteome {ECO:0000313|Proteomes:UP000032141};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833, ECO:0000256|PROSITE-ProRule:PRU00723};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00723}.
FT DOMAIN 1519..1548
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 1574..1600
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT DOMAIN 1601..1628
FT /note="C3H1-type"
FT /evidence="ECO:0000259|PROSITE:PS50103"
FT ZN_FING 1519..1548
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 1574..1600
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT ZN_FING 1601..1628
FT /note="C3H1-type"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00723"
FT REGION 1..79
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 219..241
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 321..357
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 525..560
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 792..813
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 921..945
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1120..1149
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1385..1424
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1440..1466
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1637..1676
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..12
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 15..32
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 65..78
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 219..233
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 342..351
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 545..558
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 792..806
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1120..1147
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1401..1410
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1411..1421
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1644..1660
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1750 AA; 192435 MW; E31698EFBA323834 CRC64;
MDSSHYNPSY GQWNPPLPLL PPPPVPPPPP PPRESHPDSP NFYVPSSQNG EQRLHYLPLK
PAVNQPSPYY SQQQPPQQHL QCIPEKYSYE SQKVSQPLSF KKSRDISQSA GVGYSDRRLD
SWTVDAAQGR RDSSGVGINR GLDGGSWSRD EFRNLGHLRK ESGAARIDGN YQDRGQLKAE
CFRGLDDGHR SLSSRVGYSS EGARNLRWNE ARRRDEYYHL DRGRREGSND SKRTPGKLTQ
KKSALLRLET PRSHLNGREN ARNRCSYSGR RFNSNSFKCK EHFGYSDRGL VENQRGRTSV
NLDVSFQSNR LVAKSVASPA SAGIHPCRSV TPRSSKAGRA LVPDKSEKAS VTEENGNQSI
LKSHEDLLDR TGTGCKALLP KGMEMEDNVK KKTNTSPKKL LISWSTVADL SGVSEARIRF
AGSVRSQPCE DVDMDCLPST NLSVMDVNAE DDSKGINKNV DSLSLENDSR GLPKCPVSSA
SLEIPNVSTE LANANNNVSG DLANAHSSTV CTFTNTMVNP LVENENGNRE ESMETTARNS
AAEMADNRDS DKGEKACAKD TSSSLAKVDV KESSIVLPVE RTDGCSGSGE SGLAMAVPSD
VCTENVSAER LVSDEDLGIA SHYPAEIPSV DQLSGSTIRG LEVCLPEPDV SLSKGITDGS
VECLVQRDVR QKDSTFCNSL PGSPPLVTKT NLAVGINGMS AYETVTNAES GLLESQPCST
VSDAFGTVWN LAVNKNLDED PSRASSCLVS DSPVIPCHIS PLVAVTEQIQ NKTSIQANYS
DSRDGIMHEE NNCAEKPDVD TQDEKTYPSG GTLNYKTRGT DIVAVTGGSV FPSQSLSSSP
RRSFRQIRSE IHVAATVDET CKDKPKPKHS GGTIKYRTGG TNIFAFSGDS VPCGSLSNPP
RLYRQIRSEV HVASMVDDTS TCKEKAKPSG GTSKCRTPEA DVTSDVGGQE KYSLNRVKTD
IFDGEVWSSV VNVSGAEILG DSGVPLSRSH SNGKDHVISV RDRDSQSKTS LSSWYDVENM
EKKSNYSAQK RFSRALPFVS GPKKDANPSN KCHTWHRKFD TSASPLVAVK PLSPTLITQP
KFPIVTAQSS SSYVRKGNSL LRKPSYGSLV KTGEIITLER QSNPSSDSST SKVSNAIVTS
SGKSPLSYSR DHLISGLPES IMDSATSEEA NVAHSGGDAS KTSDTLIQTY YASDCQQKRN
HPKLDSSNLK RTVYVKRKAN QLIPTSDGYF KRSKNQLVRT SASCVSHSPD DALDSQAATT
MVSKRSSSAA FSHSAVTRPY KRSKFSLVWT QNDPQSRLRT SHMRYQRILP QLVPWKRVTY
WRRLMKSVSG SALRNSSFSK SSQKLSMMRK RHTVYTRSTN GYSLRKSKVL SLGGSHLKWS
KSIERDSRKA NQEATLTAAE FSKKESEKHS GQSTTRMTSR NHLTRERVFR IGSLRYKMDS
SRRTLQRISD DDSPCSGPTE NGKGAERPFI PKRLVIGNEE YVRVGNGNEL VRDPKKRTRA
LANEKVRWSL HNVRLRSAKK KKKYCQFFTR FGKCSKDDGK CPYVHDPSKI AVCTKFLNGL
CANETCKLTH KVIPARMPDC SYFLQGLCNN DACPYRHVHV NPSAAICDGF LKGYCSDGDE
CRKKHSYTCP VFEATGSCSQ GSKCKLHHPK NQSKGRKRKR PAEPSERNSR GRYFGSRHKV
FSESEPMVVD RRPTNSADFG IEEGLDFIFL GATEYEAGDN SDLAGEESVS SASEEPVSVY
NLIRPVALMQ
//
