ID A0A0E0BVX2_9ORYZ Unreviewed; 1530 AA.
AC A0A0E0BVX2;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 18-JUN-2025, entry version 33.
DE RecName: Full=Histone deacetylase interacting domain-containing protein {ECO:0000259|SMART:SM00761};
OS Oryza meridionalis.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=40149 {ECO:0000313|EnsemblPlants:OMERI01G00130.4};
RN [1] {ECO:0000313|EnsemblPlants:OMERI01G00130.4}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
RN [2] {ECO:0000313|EnsemblPlants:OMERI01G00130.4}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=OR44 {ECO:0000313|EnsemblPlants:OMERI01G00130.4};
RA Zhang J., Kudrna D., Lee S., Talag J., Welchert J., Wing R.A.;
RT "OmerRS3 (Oryza meridionalis Reference Sequence Version 3).";
RL Submitted (MAY-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00810}.
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DR EnsemblPlants; OMERI01G00130.2; OMERI01G00130.2; OMERI01G00130.
DR EnsemblPlants; OMERI01G00130.4; OMERI01G00130.4; OMERI01G00130.
DR Gramene; OMERI01G00130.2; OMERI01G00130.2; OMERI01G00130.
DR Gramene; OMERI01G00130.4; OMERI01G00130.4; OMERI01G00130.
DR eggNOG; KOG4204; Eukaryota.
DR Proteomes; UP000008021; Chromosome 1.
DR GO; GO:0000785; C:chromatin; IEA:TreeGrafter.
DR GO; GO:0000118; C:histone deacetylase complex; IEA:TreeGrafter.
DR GO; GO:0003714; F:transcription corepressor activity; IEA:InterPro.
DR GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; IEA:TreeGrafter.
DR FunFam; 1.20.1160.11:FF:000001; Paired amphipathic helix protein Sin3; 1.
DR FunFam; 1.20.1160.11:FF:000002; Paired amphipathic helix protein SIN3; 1.
DR FunFam; 1.20.1160.11:FF:000003; Paired amphipathic helix SIN3-like protein; 1.
DR Gene3D; 1.20.1160.11; Paired amphipathic helix; 3.
DR InterPro; IPR013194; HDAC_interact_dom.
DR InterPro; IPR003822; PAH.
DR InterPro; IPR036600; PAH_sf.
DR InterPro; IPR039774; Sin3-like.
DR InterPro; IPR031693; Sin3_C.
DR PANTHER; PTHR12346:SF0; SIN3A, ISOFORM G; 1.
DR PANTHER; PTHR12346; SIN3B-RELATED; 1.
DR Pfam; PF02671; PAH; 3.
DR Pfam; PF08295; Sin3_corepress; 1.
DR Pfam; PF16879; Sin3a_C; 1.
DR SMART; SM00761; HDAC_interact; 1.
DR SUPFAM; SSF47762; PAH2 domain; 3.
DR PROSITE; PS51477; PAH; 3.
PE 4: Predicted;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00810}; Reference proteome {ECO:0000313|Proteomes:UP000008021};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Repressor {ECO:0000256|ARBA:ARBA00022491};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 589..689
FT /note="Histone deacetylase interacting"
FT /evidence="ECO:0000259|SMART:SM00761"
FT REGION 47..80
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 133..184
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 334..441
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 943..1207
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 658..685
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 48..66
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 67..76
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 156..184
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 362..387
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 394..416
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 423..437
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1001..1015
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1127..1139
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1147..1156
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1174..1185
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1530 AA; 170960 MW; 7EB25692034BC5B7 CRC64;
MWFATGAGQR GGTEEAASSL LFFFFASPSP RSSPILPSRV SRLAEAISRL SSPPRASPSP
RAAPSSRRAR GSRRSQRRAD PAAVYVFRGL RGSAAAATGR LFCRKRRWGG GGGGGRESVY
GGMKRARDDA LMGSQLKRPN VGRSDPTAQP QHMPLGPASA AAPPPQAAAA PPAQPPTGGA
TAGQKLTTND ALVYLKAVKD KFQDKREKYE EFLEVMRDFK SERIDTNGVI IRVKTLFNGY
PELILGFNTF LPKGYAIKLQ EEKKPVDFVE AINFVNKIKN RFQHDEHVYK AFLDILNMYR
KDNKSIQDVY HEVAVLFADH KDLLEEFQHF LPDTSVPPQA VAPSRPGIRR DDRTSLVPPA
SRNEKRDKAH PHADRESVDR PDLDHVIQRR RPKDRHDYDR GDKDGELDSK DLDIGLKRKP
FPRKMEDPTS ADAHHGGPLE NHGILGASAS LYDNKDALKS VYTQEFHFCE KVKEKLEHDA
YQEFLKCLHI YSQEIITRSE LKNLVNDILQ QHPDLMDGFN EFLEHCENIG QTGRIVKTEE
RKEGGKGTEK EPDRIEKVPA YKEAPSQKPV FSSKEKYIYK PVSELDLSNC QRCTPSYRLL
PKHYPMPPAG NKTELGASVL NDHWVSVTSG SEDYSFKHMR KNQYEESLFR CEDDRFELDM
LLESVNAATK RVEELIEKMQ DNSLKPDSPI RIDEHLTPLN LRCIERLYGD HGLDVMDVLR
KNASVALPVI LTRLKQKQEE WSRCRSDFNK VWAEIYAKNY HKSLDHRSFY FKQQDTKNLS
TKSLLTEIKE INEKKRKEDD VLLAIAAGNR RPIVPNMSFD YVDSNIHEDM YKIIKYSCGE
VCSSSDQLDK VVRIWATFLE PILGVQPRTH GAEDADAVKP KSRTTKSGLA TVGDINTTAA
GAVAKHGHDE NIPQEQTPPS LARMVNGVAT DTQNGFHDVD RTARRAEEPS NTAVNGRVQG
ASPGTNEIPA VSTQNMPTER SAENIPVART EQHGNAKANL EPTSGVNASR SSHAGNDTAA
EARAGNETLP SVEGGETGRS GSTLNGGGAS EGNKGRLFNE ASASHNTPKV EREEGELSPN
GDFEEDNFAP FEDGAVDGVS KAKEGSTGRP FQGRPGEAQP SCAEAAGEND ADADDEGEES
AQRSTEDSEN ASEGGEDASG SESGDGEECS REDHDEEEED MDHDDQDAKA ESEGEAEGTT
ETHDVEGGIS LPLSERFLHS VKPLAKHVPT ALHDRDEKSS RIFYGNDSFY VLFRLHQILY
ERLLSAKTNS SSAEKKWRTS KDTNPPDLYA KFISALYNLL DGSSDNTKFE DDCRSIIGTQ
SYVLFTLDKL IYKVVKQLQA IATDEMDNKL LQLYLYEKSR SPGRFFDLVY HENARVLLHE
ESIYRFECCS NPTKLSIQLM EYGHEKPEVT AVSIDPNFSS YLFNEYLSSM SDRKLSEGVF
LERNKRKHSN NDEPSDSLKA MDGVKVANGL ECKISCKTSK VSYVLDTEDF LFRLRKRRRL
SPVGNVPEKL QASKTYAAKV QRFHRFLSKP
//
