ID A0A0E0DKP9_9ORYZ Unreviewed; 1397 AA.
AC A0A0E0DKP9;
DT 27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT 27-MAY-2015, sequence version 1.
DT 18-JUN-2025, entry version 37.
DE RecName: Full=Histone deacetylase interacting domain-containing protein {ECO:0000259|SMART:SM00761};
OS Oryza meridionalis.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX NCBI_TaxID=40149 {ECO:0000313|EnsemblPlants:OMERI05G00080.1};
RN [1] {ECO:0000313|EnsemblPlants:OMERI05G00080.1}
RP IDENTIFICATION.
RG EnsemblPlants;
RL Submitted (APR-2015) to UniProtKB.
RN [2] {ECO:0000313|EnsemblPlants:OMERI05G00080.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. OR44 {ECO:0000313|EnsemblPlants:OMERI05G00080.1};
RA Zhang J., Kudrna D., Lee S., Talag J., Welchert J., Wing R.A.;
RT "OmerRS3 (Oryza meridionalis Reference Sequence Version 3).";
RL Submitted (MAY-2018) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC ECO:0000256|PROSITE-ProRule:PRU00810}.
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DR STRING; 40149.A0A0E0DKP9; -.
DR EnsemblPlants; OMERI05G00080.1; OMERI05G00080.1; OMERI05G00080.
DR Gramene; OMERI05G00080.1; OMERI05G00080.1; OMERI05G00080.
DR eggNOG; KOG4204; Eukaryota.
DR HOGENOM; CLU_007140_1_0_1; -.
DR Proteomes; UP000008021; Chromosome 5.
DR GO; GO:0000785; C:chromatin; IEA:TreeGrafter.
DR GO; GO:0000118; C:histone deacetylase complex; IEA:TreeGrafter.
DR GO; GO:0003714; F:transcription corepressor activity; IEA:InterPro.
DR GO; GO:0000122; P:negative regulation of transcription by RNA polymerase II; IEA:TreeGrafter.
DR FunFam; 1.20.1160.11:FF:000001; Paired amphipathic helix protein Sin3; 1.
DR FunFam; 1.20.1160.11:FF:000002; Paired amphipathic helix protein SIN3; 1.
DR FunFam; 1.20.1160.11:FF:000003; Paired amphipathic helix SIN3-like protein; 1.
DR Gene3D; 1.20.1160.11; Paired amphipathic helix; 3.
DR InterPro; IPR013194; HDAC_interact_dom.
DR InterPro; IPR003822; PAH.
DR InterPro; IPR036600; PAH_sf.
DR InterPro; IPR039774; Sin3-like.
DR InterPro; IPR031693; Sin3_C.
DR PANTHER; PTHR12346:SF59; PAIRED AMPHIPATHIC HELIX PROTEIN SIN3-LIKE 3; 1.
DR PANTHER; PTHR12346; SIN3B-RELATED; 1.
DR Pfam; PF02671; PAH; 3.
DR Pfam; PF08295; Sin3_corepress; 1.
DR Pfam; PF16879; Sin3a_C; 1.
DR SMART; SM00761; HDAC_interact; 1.
DR SUPFAM; SSF47762; PAH2 domain; 3.
DR PROSITE; PS51477; PAH; 3.
PE 4: Predicted;
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00810}; Reference proteome {ECO:0000313|Proteomes:UP000008021};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Repressor {ECO:0000256|ARBA:ARBA00022491};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 468..568
FT /note="Histone deacetylase interacting"
FT /evidence="ECO:0000259|SMART:SM00761"
FT REGION 1..45
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 197..300
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 412..437
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 747..772
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 854..899
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 929..1077
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 31..45
FT /note="Low complexity"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 230..293
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 412..434
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 858..877
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 992..1020
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1038..1048
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1056..1067
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1397 AA; 158360 MW; B03F67F312C2675B CRC64;
MKAAPTASQH LKRPNLARSD PSPMPAPAPA PSQQGQGPSQ NQNQNQKLTT NDALLYLKAV
KDKFQDKRDK YDEFLEVMRD FKSGRIDTAG VIIRVKTLFN GHHELILGFN AFLPKGFAIK
LQDLEKKPVD FMEAINFVNK IKARFQQEDH VYKSFLGILN MYRLHNKSIQ DVYGEVAALF
RDYPDLLEEF KHFLPDTSTA PQPVTVPRGV SSRHDDRGPL MPSARNAQSI KRERAYPSTA
DRDFNIDRPD LEDDPHRRHV EKETDGKVDR NRRDYEREEK DGEYDSKDLD GGQRKRKLAR
KMDGALADTH QGGFSTSTSP YDDKDALKSA YTKEFRFCEK VKEKLEPEAY QEFLKCLHIY
SQEIITRSEL KNLVDDILQH YPDLMNGFNE FLEQCENIGQ TSRIVRTLEK ERNKAREVDD
RERDREKERE KLDKGSALNS KEGAIHKAIT FSSKEYLCKP ISELDLSNCQ RCTPSYRLLP
KNYPMPPASC RTDLGASVLN DLWVSVTSGS EDYSFKHMRK NQYEESLFRC EDDRFELDML
LESVIVAIKR VEELIEKMQD NSIKPDSPIR IDEHLTPLNL RCIERLYGDH GLDVMDVLRK
NASVALPVIL TRLKQKQEEW SRCRLDFNKV WAEIYAKNYH KSLDHRSFYF KQQDTKNLST
KALLAAIKEV NEKKRKEDDM LLTIAAGNRR PIIPNMSFEY VDPEIHEDLY QIIKYSCGEV
CNSSDQVDKV MRIWTTFLEP ILGVHPRGHG VEDEKPKSRS TKAGPANVEI NNASTNGTVT
VKHAHSDEIV PKEQASCSRA ILVGGVAADA QNSLQDAERT VRRDEEPPNT MLDRMLQNTT
PAVDVIPAVS GQNISTERSV ESSHLSRPEQ NHSRANMEVK PGINASSATP AGGEVVSDAK
GDNETIMGSG ETRIPGSFNS KDNKLCPINE YSGSHNHTKV EREEGELSPN GDVGENFGPF
DGVSVDGVSK PKEDSTRRLL QGRPMDAAEF AGENDADADD EGEESAQMME DSENASEACE
DASGSESGDG EECSREDHED EDHMDQDDPD AKAESEGEAA ENTEAQDADA GISLPFSGRS
HNAVKPLAKH VPRALNDHEE KFSCIFYGND SFYVLFRLHQ ILYERILSAK TNSSSAEKKW
KASKDTNLPD QYSKFMSALY NLLDGSSDNT KFEDDCRSII GTQSYVLFTL DKLIYKVLQA
IASDEMDNKL LQLYIYEKSR SPGRFFDLVY HENARVLLHD ESIYRFECCS NPTRLSIQLM
EYGHEKPEVT AVSIDPNFSS YLYNEYLSSI SNAKLYDDIF LGRNKRKRGG NDDSQASLKA
IDAFMVTNGL ECKISCKSSK VSYVLDTEDF LFHIRKRRRV SSSGTIPEKA DFVKAYAVKP
LYQIRDADVL RKLPCEP
//