ID   A0A0E0MJI0_ORYPU        Unreviewed;       410 AA.
AC   A0A0E0MJI0;
DT   27-MAY-2015, integrated into UniProtKB/TrEMBL.
DT   27-MAY-2015, sequence version 1.
DT   18-JUN-2025, entry version 36.
DE   RecName: Full=RNA polymerase subunit H/Rpb5 C-terminal domain-containing protein {ECO:0008006|Google:ProtNLM};
OS   Oryza punctata (Red rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza.
OX   NCBI_TaxID=4537 {ECO:0000313|EnsemblPlants:OPUNC12G02390.1};
RN   [1] {ECO:0000313|EnsemblPlants:OPUNC12G02390.1}
RP   IDENTIFICATION.
RG   EnsemblPlants;
RL   Submitted (APR-2015) to UniProtKB.
RN   [2] {ECO:0000313|EnsemblPlants:OPUNC12G02390.1}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Zhang J., Kudrna D., Lee S., Talag J., Welchert J., Wing R.A.;
RT   "OpunRS2 (Oryza punctata Reference Sequence Version 2).";
RL   Submitted (MAY-2018) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC   -!- SIMILARITY: Belongs to the archaeal Rpo5/eukaryotic RPB5 RNA polymerase
CC       subunit family. {ECO:0000256|ARBA:ARBA00025765}.
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DR   STRING; 4537.A0A0E0MJI0; -.
DR   EnsemblPlants; OPUNC12G02390.1; OPUNC12G02390.1; OPUNC12G02390.
DR   Gramene; OPUNC12G02390.1; OPUNC12G02390.1; OPUNC12G02390.
DR   eggNOG; KOG3218; Eukaryota.
DR   Proteomes; UP000026962; Chromosome 12.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003899; F:DNA-directed RNA polymerase activity; IEA:InterPro.
DR   GO; GO:0006366; P:transcription by RNA polymerase II; IEA:TreeGrafter.
DR   GO; GO:0006362; P:transcription elongation by RNA polymerase I; IEA:TreeGrafter.
DR   GO; GO:0042797; P:tRNA transcription by RNA polymerase III; IEA:TreeGrafter.
DR   FunFam; 3.90.940.20:FF:000001; DNA-directed RNA polymerases I, II, and III subunit RPABC1; 1.
DR   Gene3D; 3.40.1340.10; RNA polymerase, Rpb5, N-terminal domain; 2.
DR   Gene3D; 3.90.940.20; RPB5-like RNA polymerase subunit; 1.
DR   InterPro; IPR014381; Arch_Rpo5/euc_Rpb5.
DR   InterPro; IPR005571; RNA_pol_Rpb5_N.
DR   InterPro; IPR036710; RNA_pol_Rpb5_N_sf.
DR   InterPro; IPR000783; RNA_pol_subH/Rpb5_C.
DR   InterPro; IPR035913; RPB5-like_sf.
DR   PANTHER; PTHR10535:SF2; DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5A; 1.
DR   PANTHER; PTHR10535; DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1; 1.
DR   Pfam; PF01191; RNA_pol_Rpb5_C; 1.
DR   Pfam; PF03871; RNA_pol_Rpb5_N; 1.
DR   SUPFAM; SSF53036; Eukaryotic RPB5 N-terminal domain; 2.
DR   SUPFAM; SSF55287; RPB5-like RNA polymerase subunit; 1.
PE   3: Inferred from homology;
KW   Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW   Reference proteome {ECO:0000313|Proteomes:UP000026962}.
FT   DOMAIN          153..233
FT                   /note="RNA polymerase Rpb5 N-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF03871"
FT   DOMAIN          337..409
FT                   /note="RNA polymerase subunit H/Rpb5 C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF01191"
FT   REGION          1..82
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        1..11
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        12..46
FT                   /note="Low complexity"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        53..82
FT                   /note="Low complexity"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   410 AA;  45106 MW;  6DEC38526EB76EAA CRC64;
     MSHSTLSQQS FSTIESAESA TVATSIESAE STTAATPAAV SAARDVSPPP AVAPAARDVS
     PPSAASAAPD VSPPAAVSAA RDVPPPSVAM AAEMEVDDVD XRDVPPPPAV APAAARDVPP
     PSVTMAAEME VDDVDVHEVP ECIASMIDRG SVESHRLFLA RRTAMEMLRD RGYSVPEAEI
     ARTLPEFRAW WAEKPGIERL AFTTTLVSDT SKKVQLVFCP PEPVKVATIR EIYLQTKEEN
     LSRLILILQS KILSRAREAI KEIFKFKVDI FQVQLVFCPP EPVKVATIRE IYLQTKEENL
     SRLILILQSK ILSRAREAIK EIFKFKVDIF QATDLLVNIT KHVLKPKHEV LSADQKAKLL
     KEYNVEDSQL PRMLETDAVA RYYGFDKGTV VKVTYDSELT GKRVAYRCVF
//