ID A0A0K2JHL0_SPIKU Unreviewed; 445 AA.
AC A0A0K2JHL0;
DT 11-NOV-2015, integrated into UniProtKB/TrEMBL.
DT 11-NOV-2015, sequence version 1.
DT 05-FEB-2025, entry version 40.
DE SubName: Full=RNA polymerase sigma factor RpoD {ECO:0000313|EMBL:ALA97907.1};
GN Name=rpoD {ECO:0000313|EMBL:ALA97907.1};
GN ORFNames=SKUN_001021 {ECO:0000313|EMBL:ALA97907.1};
OS Spiroplasma kunkelii CR2-3x.
OC Bacteria; Bacillati; Mycoplasmatota; Mollicutes; Entomoplasmatales;
OC Spiroplasmataceae; Spiroplasma.
OX NCBI_TaxID=273035 {ECO:0000313|EMBL:ALA97907.1, ECO:0000313|Proteomes:UP000062963};
RN [1] {ECO:0000313|EMBL:ALA97907.1, ECO:0000313|Proteomes:UP000062963}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CR2-3x {ECO:0000313|EMBL:ALA97907.1,
RC ECO:0000313|Proteomes:UP000062963};
RX PubMed=26494665;
RA Davis R.E., Shao J., Dally E.L., Zhao Y., Gasparich G.E., Gaynor B.J.,
RA Athey J.C., Harrison N.A., Donofrio N.;
RT "Complete Genome Sequence of Spiroplasma kunkelii Strain CR2-3x, Causal
RT Agent of Corn Stunt Disease in Zea mays L.";
RL Genome Announc. 3:e01216-e01215(2015).
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DR EMBL; CP010899; ALA97907.1; -; Genomic_DNA.
DR RefSeq; WP_053391067.1; NZ_CP010899.1.
DR AlphaFoldDB; A0A0K2JHL0; -.
DR STRING; 273035.SKUN_001021; -.
DR KEGG; skn:SKUN_001021; -.
DR PATRIC; fig|273035.7.peg.1260; -.
DR OrthoDB; 9809557at2; -.
DR Proteomes; UP000062963; Chromosome.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0016987; F:sigma factor activity; IEA:UniProtKB-KW.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR FunFam; 1.10.601.10:FF:000001; RNA polymerase sigma factor SigA; 1.
DR Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 2.
DR InterPro; IPR014284; RNA_pol_sigma-70_dom.
DR InterPro; IPR000943; RNA_pol_sigma70.
DR InterPro; IPR007627; RNA_pol_sigma70_r2.
DR InterPro; IPR007624; RNA_pol_sigma70_r3.
DR InterPro; IPR007630; RNA_pol_sigma70_r4.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR InterPro; IPR013324; RNA_pol_sigma_r3/r4-like.
DR InterPro; IPR050239; Sigma-70_RNA_pol_init_factors.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR NCBIfam; TIGR02937; sigma70-ECF; 1.
DR PANTHER; PTHR30603; RNA POLYMERASE SIGMA FACTOR RPO; 1.
DR PANTHER; PTHR30603:SF60; RNA POLYMERASE SIGMA FACTOR RPOD; 1.
DR Pfam; PF04542; Sigma70_r2; 1.
DR Pfam; PF04539; Sigma70_r3; 1.
DR Pfam; PF04545; Sigma70_r4; 1.
DR PRINTS; PR00046; SIGMA70FCT.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
DR SUPFAM; SSF88659; Sigma3 and sigma4 domains of RNA polymerase sigma factors; 3.
DR PROSITE; PS00715; SIGMA70_1; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000062963};
KW Sigma factor {ECO:0000256|ARBA:ARBA00023082};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 175..188
FT /note="RNA polymerase sigma-70"
FT /evidence="ECO:0000259|PROSITE:PS00715"
SQ SEQUENCE 445 AA; 52066 MW; EE81D95AA2FCE559 CRC64;
MVLSKKEVRD MKSFDEFKEY INKYLEENNN EIEQEKLITL INDHFEVDDN DVEEYFEELV
ANGVEFSDIN LEDLEENEVP EPEKVTKKQP DEKLRYKVGG ISNETKIQDI IKAYFNILGT
SKILTREEEI KYAKMLESSD PEERRFGRDK LITSNLKLVV SVARKHLNRG LDFSDLIEEG
NIGLIKAVDK FDYKRGFKFS TYATWWIRQA TTRAIADQAR TIRIPVHMVE TINKLTRIER
QLTQELGREP SYNEIAEKMG QGMVGEKVRE IKRLSIEPVS LEKPIGDEDD THFGDFVDDK
DIFTPDEYAE KESLREVIDE VFHEILSARE EKVIRMRFGL LPTKLRTVLR LAKECEDETF
PELVQTVKTL DIHYDTPIEK VQSQKNALID KHLSKYDSPK TLEEVGKEFK VTRERIRQIE
AKTIRKFKPN QVNSKAKVLK DFFKG
//
