ID A0A0S3T5X6_PHAAN Unreviewed; 1832 AA.
AC A0A0S3T5X6;
DT 17-FEB-2016, integrated into UniProtKB/TrEMBL.
DT 17-FEB-2016, sequence version 1.
DT 28-JAN-2026, entry version 45.
DE RecName: Full=[Histone H3]-trimethyl-L-lysine(4) demethylase {ECO:0008006|Google:ProtNLM};
GN Name=Vigan.10G215600 {ECO:0000313|EMBL:BAU00551.1};
GN ORFNames=VIGAN_10215600 {ECO:0000313|EMBL:BAU00551.1};
OS Vigna angularis var. angularis.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna.
OX NCBI_TaxID=157739 {ECO:0000313|EMBL:BAU00551.1, ECO:0000313|Proteomes:UP000291084};
RN [1] {ECO:0000313|EMBL:BAU00551.1, ECO:0000313|Proteomes:UP000291084}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Shumari {ECO:0000313|Proteomes:UP000291084};
RX PubMed=26616024; DOI=10.1038/srep16780;
RA Sakai H., Naito K., Ogiso-Tanaka E., Takahashi Y., Iseki K., Muto C.,
RA Satou K., Teruya K., Shiroma A., Shimoji M., Hirano T., Itoh T., Kaga A.,
RA Tomooka N.;
RT "The power of single molecule real-time sequencing technology in the de
RT novo assembly of a eukaryotic genome.";
RL Sci. Rep. 5:16780-16780(2015).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; AP015043; BAU00551.1; -; Genomic_DNA.
DR OrthoDB; 1678912at2759; -.
DR Proteomes; UP000291084; Chromosome 10.
DR GO; GO:0000785; C:chromatin; IEA:TreeGrafter.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0032452; F:histone demethylase activity; IEA:TreeGrafter.
DR GO; GO:0008270; F:zinc ion binding; IEA:UniProtKB-KW.
DR GO; GO:0010468; P:regulation of gene expression; IEA:TreeGrafter.
DR CDD; cd16100; ARID; 1.
DR CDD; cd15543; PHD_RSF1; 1.
DR FunFam; 2.60.120.650:FF:000078; Predicted protein; 1.
DR FunFam; 2.60.120.650:FF:000042; Transcription factor jumonji (JmjC) domain-containing protein; 1.
DR Gene3D; 2.60.120.650; Cupin; 2.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 2.
DR InterPro; IPR001606; ARID_dom.
DR InterPro; IPR036431; ARID_dom_sf.
DR InterPro; IPR003347; JmjC_dom.
DR InterPro; IPR003349; JmjN.
DR InterPro; IPR013637; Lys_sp_deMease-like_dom.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR004198; Znf_C5HC2.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR10694; LYSINE-SPECIFIC DEMETHYLASE; 1.
DR PANTHER; PTHR10694:SF133; LYSINE-SPECIFIC DEMETHYLASE JMJ17; 1.
DR Pfam; PF01388; ARID; 1.
DR Pfam; PF02373; JmjC; 1.
DR Pfam; PF02375; JmjN; 1.
DR Pfam; PF00628; PHD; 1.
DR Pfam; PF08429; PLU-1; 1.
DR Pfam; PF02928; zf-C5HC2; 1.
DR SMART; SM01014; ARID; 1.
DR SMART; SM00501; BRIGHT; 1.
DR SMART; SM00558; JmjC; 1.
DR SMART; SM00545; JmjN; 1.
DR SMART; SM00249; PHD; 3.
DR SUPFAM; SSF46774; ARID-like; 1.
DR SUPFAM; SSF51197; Clavaminate synthase-like; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 3.
DR PROSITE; PS51011; ARID; 1.
DR PROSITE; PS51184; JMJC; 1.
DR PROSITE; PS51183; JMJN; 1.
DR PROSITE; PS01359; ZF_PHD_1; 3.
DR PROSITE; PS50016; ZF_PHD_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW Reference proteome {ECO:0000313|Proteomes:UP000291084};
KW Repeat {ECO:0000256|ARBA:ARBA00022737};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 28..69
FT /note="JmjN"
FT /evidence="ECO:0000259|PROSITE:PS51183"
FT DOMAIN 95..189
FT /note="ARID"
FT /evidence="ECO:0000259|PROSITE:PS51011"
FT DOMAIN 241..291
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT DOMAIN 381..547
FT /note="JmjC"
FT /evidence="ECO:0000259|PROSITE:PS51184"
FT REGION 1751..1777
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1751..1760
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1832 AA; 209117 MW; EC8BEFD418761DC3 CRC64;
MGKGKPRAVE KGVVGPSLSV ASSTIPAGPV YYPTEDEFKD PLEYIYKIRP EAEPYGICKI
VPPKSWKPPF ALDLDAFTFP TKTQAIHKLQ ARPASCDSKT FDLEYSRFLK DHCSKKSRKR
VVFEGAELDL CKLFNAVKRY GGYDKVVDGK KWGDVARFVR SSGKISDCAK HVLCQLYREH
LYDYEKFYNQ MNQGTDQSCK KSLYEEHKSD CGVKPLVSKR IHKSIDCLKR KDSKVQGEDH
DQICEQCKSG LHGELMLLCD RCDKGWHTYC LSPPLKQIPM GNWYCFNCLN SDRDSFGFVP
GKHYSLEAFR RKADLSRRRW FGSGPVSRVQ IEKKFWDIVE GLVGEVEVMY GNDLDTSVYG
SGFPRVADKK PESIDDKSWE EYSTNPWNLN NLPKLKGSML RAVHHNITGV MVPWLYIGML
FSSFCWHFED HCFYSMNYLH WGEAKCWYSV PGSQSSAFEK VMRSSLPDLF DAQPDLLFQL
VTMLNPSVLQ ENGVPVYSIL QEPGNFVITF PRSYHGGFNL GLNCAEAVNF APADWLPHGA
FGADLYQRYH KTAVLSHEEL LCVVAQFGEV DGRVSSYLKN ELLRISVKEK SRREKLWKTG
IIKSSRMAPR KCPQFVGTEE DPACIICQQY LYLSAVVCGC RPSAFVCLEH WEHLCECKTV
KLRLLYRHSL AELYDLAYSM DKYTSEGKAE CRSVKRQPSC LSALTKKVKG GSITFAQLAT
EWLLQSSTIL QNVFLQDAFV TALRKAEQFL WAGSEMDSVR DMVRNLLQAQ EWAEGIRDCV
TKIELWLCHR DTSVKKVHLE SVDELLKVSP APCNEPCYHK LKEYAEEARL FVQEIDTALS
MCLNMSELEL LHSKACGLPI YVKENKKLEG KISSTKAWLD SVRNCISARH PAALHVDVFY
KLKAEFWDLQ VQLPEIDVLQ NLLNEAESCS AQCHDMLEGP MNLKNVSLLL KEWENFAVDV
PELKILRQYH SDTVSWVSHC NDVLGRVHMQ EDQHDAVDKL NSIFKAGLSL KIQVDELPLV
EVELKKANCR EKAVKAHDFK MPLEFIQKLL KEATMLQIEQ EKQFVNLSCM LTVTIPWEER
AREMLSHGAP ISDFEDMIRA SENIFIILPS LKDVKDALSE ANSWLKNSKP YFVSSMQTSD
SMQKVEDLQM LVSQSKHLKV SFEERGMLEL VLKNCRRWEY EACSVLDDAR CLFELDNSLH
EVDSGLMCNM EDLIVRIQST IASGISLGFA FSEISKLQAS CSTLQWCKRA LSFSNCSPSL
EDVLEVAEGL SHSSISGALL KLLIGGLEWL RKALEAISGP YNSRRSKLTE IQAILTDYQT
INMTFTAVNI QLEDAVGKHK MWQEQVCQFF GLSFRERSWS SILQLKEYGD TIAFGCCELD
LVLSEVKKVE NWKKTCMDKL GASVKNENSL LHALEKMGQT LDRSLLMYDK LQDMKEPNQC
ICCFDDSEDQ EFLTCSTCMD CYHAQCVGLT EKDVAIENYQ CPYCEILRGE FCYQNGGALL
RFKKKRVELK VLTELMSEAE NFCLWIDERD VLSQLVEKAL QCKSFLKEIV ILASANVDQD
ICIISEKLAT VVKASNVAVV YDQHDTCDLE LTLAKFLWKA QVNRILNGVP KPTVQRIQKH
LKEGLAMGIS PEDHYMLKIS NVNSLGLQWT ELAKKVASDY GALGLDKVLE LIVEGEKLPV
DANEELSLLR ARCMLYCICR KPFDPERMIA CCRCNEWYHF DCMKLPCTRE VYICPACTPC
TEGLPPNHDR LTSGKFEEPK TPSPRHSNPR KKQKRDAPNL TCNTFATRDQ DSERWYPSGI
ECLRWQNRKP FRRAAKKRVE LRSLSPFICI QR
//
